RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZNF440Q8IYI8 595 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ZCCHC10Q8TBK6 192 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SLC25A36Q96CQ1 311 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 TRMT61BQ9BVS5 477 aaKnown RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 DLSTP36957 453 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ZNF283Q8N7M2 679 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 B3GNT2Q9NY97 397 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 CD8B2A6NJW9 211 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 CD8BP10966 210 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 KCNE1P15382 129 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ZNF169Q14929 603 aaPredicted RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 SORCS1Q8WY21 1168 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 RBFOX1Q9NWB1 397 aaKnown RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 CA5BQ9Y2D0 317 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 PCDHGA2Q9Y5H1 932 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 COL5A2P05997 1499 aaPredicted RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 MRC1P22897 1456 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 AMY2AP04746 511 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 HES5Q5TA89 166 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 C7orf61Q8IZ16 206 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 IMP4Q96G21 291 aaKnown RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 DIRAS3O95661 229 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 GM2AP17900 193 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ALAS2P22557 587 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 PTH2RP49190 550 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 KLBQ86Z14 1044 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 OR9A1PQ8NGU1 263 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 STK35Q8TDR2 534 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SLC38A8A6NNN8 435 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SHOXO15266 292 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 OR8U9P0C7N5 309 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ZNF691Q5VV52 312 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 CES4AQ5XG92 561 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 GLIS2Q9BZE0 524 aaPredicted RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 RIPK3Q9Y572 518 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ADAM10O14672 748 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 VILLO15195 856 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 PRSS3P35030 304 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 INHBEP58166 350 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SLC5A8Q8N695 610 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 TRMT10AQ8TBZ6 339 aaKnown RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 ADAMTS14Q8WXS8 1223 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 LUZP4Q9P127 313 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SLC43A1O75387 559 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 AKAIN1P0CW23 69 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 PTBP1P26599 531 aaKnown RBP eCLIP7.86□□□□□ -1.157e-14■■■■■ 34.6
APOB-201ENST00000233242 POU6F2P78424 691 aaPredicted RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 FAPQ12884 760 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 IRF4Q15306 451 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 TMEM35AQ53FP2 167 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 TMEM173Q86WV6 379 aaPredicted RBP7.86□□□□□ -1.15
APOB-201ENST00000233242 OR52N2Q8NGI0 321 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 MINDY3Q9H8M7 445 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 TMEM39AQ9NV64 488 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 LRFN1Q9P244 771 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SIX4Q9UIU6 781 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SARDHQ9UL12 918 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 HIF3AQ9Y2N7 669 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 KDELR3O43731 214 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 SEC14L2O76054 403 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 PROS1P07225 676 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ETFAP13804 333 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 DRD2P14416 443 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 EPHA6Q9UF33 1036 aa7.86□□□□□ -1.15
APOB-201ENST00000233242 ALX3O95076 343 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 TFAP2AP05549 437 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 VIPR1P32241 457 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 VEGFCP49767 419 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 BTN1A1Q13410 526 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 PCBP2Q15366 365 aaKnown RBP eCLIP7.85□□□□□ -1.159e-14■■■□□ 14.6
APOB-201ENST00000233242 TBC1D25Q3MII6 688 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 CD84Q9UIB8 345 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 TNFRSF10BO14763 440 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 NPC1O15118 1278 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 PCCBP05166 539 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 PPP3CBP16298 524 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 MLLT11Q13015 90 aaPredicted RBP7.85□□□□□ -1.15
APOB-201ENST00000233242 OR2AP1Q8NGE2 309 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 OR51D1Q8NGF3 324 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 BRIX1Q8TDN6 353 aaKnown RBP7.85□□□□□ -1.15
APOB-201ENST00000233242 SMARCD2Q92925 531 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 LIN37Q96GY3 246 aaPredicted RBP7.85□□□□□ -1.15
APOB-201ENST00000233242 DGAT2Q96PD7 388 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 RHCGQ9UBD6 479 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 KIF25Q9UIL4 384 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 SPDEFO95238 335 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 CNR2P34972 360 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 GGT5P36269 586 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 FUT10Q6P4F1 479 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 SIAH1Q8IUQ4 282 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 SYT3Q9BQG1 590 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 WDR26Q9H7D7 661 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 UPK3BL1B0FP48 263 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 UPK3BL2E5RIL1 263 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 ATP6V1G2-DDX39BF2Z307 99 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 LATO43561 262 aa7.85□□□□□ -1.15
APOB-201ENST00000233242 TP53P04637 393 aaPredicted RBP7.85□□□□□ -1.15
APOB-201ENST00000233242 JUNBP17275 347 aaPredicted RBP7.85□□□□□ -1.15
APOB-201ENST00000233242 BLKP51451 505 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms