RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 RTL10Q7L3V2 364 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 CLEC1AQ8NC01 280 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 OR7G3Q8NG95 312 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 ECHDC3Q96DC8 303 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 C1orf21Q9H246 121 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 CWH43Q9H720 699 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 MBD2Q9UBB5 411 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 EPHA6Q9UF33 1036 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 NAALAD2Q9Y3Q0 740 aa17.56■□□□□ 0.4
CLIP2-201ENST00000223398 DNASE1L3Q13609 305 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 PACRGLQ8N7B6 248 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF615Q8N8J6 731 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 SOX17Q9H6I2 414 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-201ENST00000223398 SP140LQ9H930 580 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 PMF1-BGLAPU3KQ54 211 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 HLA-DPB1P04440 258 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 MC3RP41968 323 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 AP2S1P53680 142 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-201ENST00000223398 MLF2Q15773 248 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-201ENST00000223398 FAM26DQ5JW98 314 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF565Q8N9K5 539 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 IL20RAQ9UHF4 553 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 PCDHGB2Q9Y5G2 931 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 PRRC2BQ5JSZ5 2229 aaKnown RBP17.55■□□□□ 0.4
CLIP2-201ENST00000223398 TRIM64A6NGJ6 449 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 CLDN25C9JDP6 229 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 RAB39AQ14964 217 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 ALG10BQ5I7T1 473 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 THAP4Q8WY91 577 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 hCG_1807616A0A1W2PRN6 198 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 FAAHO00519 579 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 DCDC1P59894 354 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 ERV3-1Q14264 604 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 WDR20Q8TBZ3 569 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 PGAM5Q96HS1 289 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 DCSTAMPQ9H295 470 aa17.55■□□□□ 0.4
CLIP2-201ENST00000223398 TRNAU1APQ9NX07 287 aaKnown RBP17.55■□□□□ 0.4
CLIP2-201ENST00000223398 BRINP1O60477 761 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 PPM1BO75688 479 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 SLC2A2P11168 524 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 UBE2NP61088 152 aaKnown RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CDKL1Q00532 357 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 NFATC4Q14934 902 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 TNFAIP8L3Q5GJ75 292 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 OR6C4Q8NGE1 309 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CHFRQ96EP1 664 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 PCDHGA6Q9Y5G7 932 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 BTAF1O14981 1849 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CKMT1AP12532 417 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 TNFRSF1BP20333 461 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 MAZP56270 477 aaKnown RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 VN1R2Q8NFZ6 395 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 OR2L2Q8NH16 312 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ADAMTS19Q8TE59 1207 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ARRDC3Q96B67 414 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 MROQ9BYG7 248 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 EEDO75530 441 aaKnown RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 C8BP07358 591 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CCR7P32248 378 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ADAM17P78536 824 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 KIR2DS3Q14952 304 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CPNE2Q96FN4 548 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CCDC120Q96HB5 630 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CCDC106Q9BWC9 280 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 METTL8Q9H825 291 aaKnown RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 NPIPA5A0A0B4J1W7 369 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 NPIPA7E9PJI5 369 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 PRH1P02810 166 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 OPN1LWP04000 364 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 NPIPA8P0DM63 369 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 EEF1A2Q05639 463 aaKnown RBP17.54■□□□□ 0.4
CLIP2-201ENST00000223398 CBLBQ13191 982 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ZFP69Q49AA0 526 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 PRAMEF17Q5VTA0 474 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF765Q7L2R6 523 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 LIX1LQ8IVB5 337 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 SFXN2Q96NB2 322 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 PRSS16Q9NQE7 514 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 ADAMTS6Q9UKP5 1117 aa17.54■□□□□ 0.4
CLIP2-201ENST00000223398 AK1P00568 194 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 NINJ1Q92982 152 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 PITX2Q99697 317 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 ACTRT3Q9BYD9 372 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 EFCAB7A8K855 629 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 WASH4PA8MWX3 477 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 EGFP01133 1207 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 CTC1Q2NKJ3 1217 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 KCTD18Q6PI47 426 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-201ENST00000223398 PARM1Q6UWI2 310 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 RTP4Q96DX8 246 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 ADH7P40394 386 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF140P52738 457 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-201ENST00000223398 GNG2P59768 71 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 GTF2IRD2BQ6EKJ0 949 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 BLOC1S3Q6QNY0 202 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 GTF2IRD2Q86UP8 949 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 HORMAD2Q8N7B1 307 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 INPP5KQ9BT40 448 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 CXXC1Q9P0U4 656 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-201ENST00000223398 LHX3Q9UBR4 397 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms