RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ARL9Q6T311 187 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 FAM46AQ96IP4 442 aaKnown RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 HHIPL1Q96JK4 782 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 KCTD7Q96MP8 289 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 MND1Q9BWT6 205 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 HDHD5Q9BXW7 423 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 SLC6A17Q9H1V8 727 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RWDD3Q9Y3V2 267 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PLPP1O14494 284 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 YY2O15391 372 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CPNE6O95741 557 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RGS6P49758 472 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 KCNJ10P78508 379 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 GRSF1Q12849 480 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 C1orf61Q13536 156 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PRRT3Q5FWE3 981 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 XAF1Q6GPH4 301 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 UNC5DQ6UXZ4 953 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 C16orf58Q96GQ5 468 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RBM18Q96H35 190 aaKnown RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 LGR4Q9BXB1 951 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 LMAN2LQ9H0V9 348 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 FAAHO00519 579 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CAPNS1P04632 268 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
RAB3D-201ENST00000222120 ARAFP10398 606 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 OSMP13725 252 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 IL1RNP18510 177 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CTBSQ01459 385 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 ST3GAL3Q11203 375 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 WSCD2Q2TBF2 565 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 IDNKQ5T6J7 187 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PPP2R2DQ66LE6 453 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 TANGO2Q6ICL3 276 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 AP3S1Q92572 193 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 HRASLS5Q96KN8 279 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 RACGAP1Q9H0H5 632 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 PMF1-BGLAPU3KQ54 211 aa12.88□□□□□ -0.35
RAB3D-201ENST00000222120 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 H3BSH0 61 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 NDUFB5O43674 189 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 OR5F1O95221 314 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 TAS2R38P59533 333 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 CXCR4P61073 352 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF33BQ06732 778 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SLC27A4Q6P1M0 643 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 FIGNL1Q6PIW4 674 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 PLEKHG7Q6ZR37 379 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 UXS1Q8NBZ7 420 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 CHFRQ96EP1 664 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 INSM2Q96T92 566 aaPredicted RBP12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SLC17A9Q9BYT1 436 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SNX7Q9UNH6 387 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 N6AMT1Q9Y5N5 214 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 RNGTTO60942 597 aaKnown RBP12.87□□□□□ -0.35
RAB3D-201ENST00000222120 OLFM2O95897 454 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 JUNBP17275 347 aaPredicted RBP12.87□□□□□ -0.35
RAB3D-201ENST00000222120 MASP1P48740 699 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 WNT3P56703 355 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 DCDC1P59894 354 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF77Q15935 545 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SPRED2Q7Z698 418 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 GALNT12Q8IXK2 581 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ZNF433Q8N7K0 673 aaPredicted RBP12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 OR6Q1Q8NGQ2 317 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 PIK3R3Q92569 461 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 RFKQ969G6 155 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 CSF3RQ99062 836 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 PCDHGA4Q9Y5G9 962 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ADORA3P0DMS8 318 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ALAS2P22557 587 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ITGB8P26012 769 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SLC9A3P48764 834 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 NKX3-2P78367 333 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 LCTLQ6UWM7 567 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ASB18Q6ZVZ8 466 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 CALHM3Q86XJ0 350 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 SFTPA1Q8IWL2 248 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 ARSGQ96EG1 525 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 RAB11FIP5Q9BXF6 653 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 DKK3Q9UBP4 350 aa12.87□□□□□ -0.35
RAB3D-201ENST00000222120 DAPL1A0PJW8 107 aa12.86□□□□□ -0.35
RAB3D-201ENST00000222120 CD72P21854 359 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms