RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 A0A1W2PRB8 838 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 SYNDIG1LA6NDD5 238 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 CCDC154A6NI56 674 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 PCDH17O14917 1159 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 DCTN3O75935 186 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 SEC24DO94855 1032 aaPredicted RBP15.3■□□□□ 0.04
LIM2-201ENST00000221973 IL6P05231 212 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 PGDP52209 483 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 MANFP55145 182 aaKnown RBP15.3■□□□□ 0.04
LIM2-201ENST00000221973 MLLT10P55197 1068 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 WNT3P56703 355 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ELAVL1Q15717 326 aaKnown RBP15.3■□□□□ 0.04
LIM2-201ENST00000221973 TIGD2Q4W5G0 525 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ANXA8L1Q5VT79 327 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 CPZQ66K79 652 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 PAPD4Q6PIY7 484 aaKnown RBP15.3■□□□□ 0.04
LIM2-201ENST00000221973 ZNF551Q7Z340 670 aaPredicted RBP15.3■□□□□ 0.04
LIM2-201ENST00000221973 MRGPREQ86SM8 312 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ANKRD46Q86W74 232 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 CLECL1Q8IZS7 167 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 NATD1Q8N6N6 113 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 C7orf57Q8NEG2 295 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ADCY4Q8NFM4 1077 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 OR11G2Q8NGC1 345 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 OR9A2Q8NGT5 310 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ZFP28Q8NHY6 868 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 ADAMTS17Q8TE56 1095 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 RIT1Q92963 219 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 SPDL1Q96EA4 605 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 MYLK2Q9H1R3 596 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 TMEM45AQ9NWC5 275 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 CLCA3PQ9Y6N3 262 aa15.3■□□□□ 0.04
LIM2-201ENST00000221973 SPTAN1Q13813 2472 aaKnown RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 IGHV1-45A0A0A0MS14 117 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 C17orf105B2RV13 164 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 PEX12O00623 359 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 CFLARO15519 480 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 C6orf47O95873 294 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ATP1B1P05026 303 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 CT62P0C5K7 136 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 COX6A1P12074 109 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 CAPN3P20807 821 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ADSLP30566 484 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 FRKP42685 505 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 HSPB3Q12988 150 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ATP1A4Q13733 1029 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 RCAN2Q14206 197 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ZNF267Q14586 743 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 PCOLCEQ15113 449 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 VPS26BQ4G0F5 336 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 C6orf163Q5TEZ5 329 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 AMER2Q8N7J2 671 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 PTPMT1Q8WUK0 201 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 NACC2Q96BF6 587 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 LRRC37BQ96QE4 947 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 LPAR4Q99677 370 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 WDR77Q9BQA1 342 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 CCDC106Q9BWC9 280 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ZNF700Q9H0M5 742 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 CXorf21Q9HAI6 301 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 ACSS1Q9NUB1 689 aaPredicted RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 FAM120CQ9NX05 1096 aaKnown RBP15.29■□□□□ 0.04
LIM2-201ENST00000221973 P4HTMQ9NXG6 502 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 FBXL4Q9UKA2 621 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 PCSK5Q92824 1860 aa15.29■□□□□ 0.04
LIM2-201ENST00000221973 PRSS51A0A1B0GVH4 220 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 MASP2O00187 686 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 RNASET2O00584 256 aaKnown RBP15.28■□□□□ 0.04
LIM2-201ENST00000221973 SLC22A2O15244 555 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 SCN2BO60939 215 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 CPSF4O95639 269 aaKnown RBP15.28■□□□□ 0.04
LIM2-201ENST00000221973 ABCB1P08183 1280 aaPredicted RBP15.28■□□□□ 0.04
LIM2-201ENST00000221973 SNRPB2P08579 225 aaKnown RBP15.28■□□□□ 0.04
LIM2-201ENST00000221973 GPC1P35052 558 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 CHAF1BQ13112 559 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 PRICKLE4Q2TBC4 344 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 FAM111BQ6SJ93 734 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 NDUFAF7Q7L592 441 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 GALNT12Q8IXK2 581 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 TEX19Q8NA77 164 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 VPS37AQ8NEZ2 397 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 OR14A16Q8NHC5 309 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 OR5P2Q8WZ92 322 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 KAT2AQ92830 837 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 DAZLQ92904 295 aaKnown RBP15.28■□□□□ 0.04
LIM2-201ENST00000221973 ERP27Q96DN0 273 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 VPS50Q96JG6 964 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 CNPPD1Q9BV87 410 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 SLC52A3Q9NQ40 469 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 MAT2BQ9NZL9 334 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 ERVK-19Q9WJR5 959 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 NUP210LQ5VU65 1888 aa15.28■□□□□ 0.04
LIM2-201ENST00000221973 NSG1A0A0A6YYJ2 146 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 LOC100653049A0A140TA62 436 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 SAGE2PA6NJ88 616 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 HRKO00198 91 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 DYRK3O43781 588 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 KRT34O76011 436 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 GALNSP34059 522 aa15.27■□□□□ 0.04
LIM2-201ENST00000221973 CDK9P50750 372 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms