RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CD6P30203 668 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 RBMXP38159 391 aaKnown RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 MAGEA2P43356 314 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 CLDN2P57739 230 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 E2F1Q01094 437 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 MFSD13AQ14CX5 517 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 HSD17B12Q53GQ0 312 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 MPP7Q5T2T1 576 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 STRA6Q9BX79 667 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 RXFP3Q9NSD7 469 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 NUDT15Q9NV35 164 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF701Q9NV72 531 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 SAGE1Q9NXZ1 904 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 NPIPB15A6NHN6 443 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ANHXE9PGG2 379 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 RHCEP18577 417 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 KIR2DS3Q14952 304 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 C16orf78Q8WTQ4 265 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 RDH12Q96NR8 316 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 KLF16Q9BXK1 252 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 MTHFD2LQ9H903 347 aaPredicted RBP18.05■□□□□ 0.48
SMPD3-201ENST00000219334 BAIAP2Q9UQB8 552 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 KCNIP3Q9Y2W7 256 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 HCFC2Q9Y5Z7 792 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 M0R129 80 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 FXYD6P3P58550 94 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 EEF1A1P5Q5VTE0 462 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF709Q8N972 641 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 KCNK12Q9HB15 430 aa18.05■□□□□ 0.48
SMPD3-201ENST00000219334 FMO6PO60774 539 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 NDUFV2P19404 249 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 CST5P28325 142 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 CTC1Q2NKJ3 1217 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 CYS1Q717R9 158 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 DPPA4Q7L190 304 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 UEVLDQ8IX04 471 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 OR8S1Q8NH09 359 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 ISG20Q96AZ6 181 aaKnown RBP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 ACTRT3Q9BYD9 372 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 ATXN7L1Q9ULK2 861 aaPredicted RBP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 SOX9P48436 509 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 ADAM17P78536 824 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 OR52B6Q8NGF0 335 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 MS4A4AQ96JQ5 239 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 SECISBP2Q96T21 854 aaKnown RBP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 SLC46A2Q9BY10 475 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 A0A0G2JPF8 293 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 HNRNPCL3B7ZW38 293 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 HNRNPCL4P0DMR1 293 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 RPS3P23396 243 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMPD3-201ENST00000219334 CD38P28907 300 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 HK3P52790 923 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 CDH15P55291 814 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 OR4D1Q15615 310 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 C1orf220Q5T0J3 134 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 KCTD9Q7L273 389 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 LRRC15Q8TF66 581 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 EHD1Q9H4M9 534 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 ALG5Q9Y673 324 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 SLC22A31A6NKX4 558 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 E7ESA3 106 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 SCGB2A1O75556 95 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 HTR1EP28566 365 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 POU3F4P49335 361 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 GRHL2Q6ISB3 625 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 RAB11FIP2Q7L804 512 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 COMMD6Q7Z4G1 85 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 DMRTB1Q96MA1 342 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 GSKIPQ9P0R6 139 aa18.04■□□□□ 0.48
SMPD3-201ENST00000219334 OR52A4PA6NMU1 304 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 FASLGP48023 281 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ECHDC3Q96DC8 303 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF471Q9BX82 626 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-201ENST00000219334 HAPLN2Q9GZV7 340 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 IL26Q9NPH9 171 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ETAA1Q9NY74 926 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 MSX1P28360 303 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 OR2T4Q8NH00 348 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 FKBP10Q96AY3 582 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 PREBQ9HCU5 417 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 HEMK1Q9Y5R4 338 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-201ENST00000219334 LRRC37A3O60309 1634 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 XPNPEP2O43895 674 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 PLATP00750 562 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 MT-ND2P03891 347 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 FRKP42685 505 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-201ENST00000219334 TMIEQ8NEW7 156 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 RLN3Q8WXF3 142 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 KLHL21Q9UJP4 597 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 OXSR1O95747 527 aaPredicted RBP18.03■□□□□ 0.48
SMPD3-201ENST00000219334 MRPS21P82921 87 aaKnown RBP18.03■□□□□ 0.48
SMPD3-201ENST00000219334 TUBB3Q13509 450 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 CASTOR1Q8WTX7 329 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ZNF778Q96MU6 729 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 CLSTN3Q9BQT9 956 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ENAMQ9NRM1 1142 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 HEBP1Q9NRV9 189 aa18.03■□□□□ 0.48
SMPD3-201ENST00000219334 ACSL6Q9UKU0 697 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms