RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ASH2LQ9UBL3 628 aa13.93□□□□□ -0.18
PTPRA-201ENST00000216877 DUX4Q9UBX2 424 aa13.93□□□□□ -0.18
PTPRA-201ENST00000216877 FKBPLQ9UIM3 349 aa13.93□□□□□ -0.18
PTPRA-201ENST00000216877 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
PTPRA-201ENST00000216877 A0A1W2PPK0 400 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 RECQL4O94761 1208 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 OAZ2O95190 189 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SPP1P10451 314 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 C18orf63Q68DL7 685 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 STX12Q86Y82 276 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 PIANPQ8IYJ0 282 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF687Q8N1G0 1237 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 NANOGP1Q8N7R0 232 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CHST13Q8NET6 341 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 OR5T2Q8NGG2 359 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 NFKBIDQ8NI38 313 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 THAP6Q8TBB0 222 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CNOT9Q92600 299 aaKnown RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF707Q96C28 371 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 C7orf34Q96L11 122 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 TBX5Q99593 518 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SEMA3GQ9NS98 782 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SPHK1Q9NYA1 384 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 MYBPHLA2RUH7 354 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 TMEM200CA6NKL6 621 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 HTR4Q13639 388 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF791Q3KP31 576 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 GCNT6Q5T4J0 391 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 OR5M10Q6IEU7 315 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 PSAPL1Q6NUJ1 521 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 TBC1D19Q8N5T2 526 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 MDGA1Q8NFP4 955 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 DBF4BQ8NFT6 615 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ELP4Q96EB1 424 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 APIPQ96GX9 242 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 MED11Q9P086 117 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 GJD2Q9UKL4 321 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 PCDHB7Q9Y5E2 793 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 NARSO43776 548 aaKnown RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CH25HO95992 272 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 PDYNP01213 254 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ATP5A1P25705 553 aaKnown RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SCNN1AP37088 669 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 OVCH2Q7RTZ1 564 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 PTOV1Q86YD1 416 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SPAG16Q8N0X2 631 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CRYBG2Q8N1P7 616 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 CLDN19Q8N6F1 224 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 OR10K1Q8NGX5 313 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 NR4A3Q92570 626 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 SENP5Q96HI0 755 aaPredicted RBP13.92□□□□□ -0.18
PTPRA-201ENST00000216877 TMEM138Q9NPI0 162 aa13.92□□□□□ -0.18
PTPRA-201ENST00000216877 GNG14A0A1W2PPG7 69 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 STMND1H3BQB6 276 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CXCL2P19875 107 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 VEGFCP49767 419 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CHRNA6Q15825 494 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 Q3ZCU0 254 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 MLIPQ5VWP3 458 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 KIAA1161Q6NSJ0 714 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ESPNLQ6ZVH7 1005 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PRSS45Q7RTY3 260 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 WDR53Q7Z5U6 358 aaPredicted RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 OR52E4Q8NGH9 312 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 FCRL1Q96LA6 429 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 MED18Q9BUE0 208 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PTTG3PQ9NZH4 202 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ANKRD34CP0C6C1 535 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PTAFRP25105 342 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CRB2Q5IJ48 1285 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 RNF180Q86T96 592 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 HDDC3Q8N4P3 179 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 SCMH1Q96GD3 660 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ATF6BQ99941 703 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ACSL6Q9UKU0 697 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PIN4Q9Y237 131 aaKnown RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CSNK1G3Q9Y6M4 447 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CENPFP49454 3210 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 TGM6O95932 706 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 UCHL1P09936 223 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 LAMP1P11279 417 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 ITGB7P26010 798 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PTX3P26022 381 aaPredicted RBP13.91□□□□□ -0.18
PTPRA-201ENST00000216877 GZMMP51124 257 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 WNT4P56705 351 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 SGCAQ16586 387 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 PLK5Q496M5 336 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 NHLRC3Q5JS37 347 aa13.91□□□□□ -0.18
PTPRA-201ENST00000216877 CLEC12AQ5QGZ9 265 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms