RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RECKO95980 971 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 RB1P06400 928 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 FCER2P06734 321 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 MRPL3P09001 348 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PTPN2P17706 415 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 ELAVL4P26378 380 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 ACVR2AP27037 513 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 APEX1P27695 318 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 RPS7P62081 194 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 SRSF5Q13243 272 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 C2orf27AQ580R0 203 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PSRC1Q6PGN9 363 aaPredicted RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 ASB18Q6ZVZ8 466 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 GALNT13Q8IUC8 556 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 OR4C15Q8NGM1 316 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 CXorf40AQ8TE69 158 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PCNPQ8WW12 178 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 DEPDC7Q96QD5 511 aa14.27□□□□□ -0.13
EFNB1-201ENST00000204961 BHLHE41Q9C0J9 482 aaPredicted RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 MBNL1Q9NR56 388 aaKnown RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PAQR5Q9NXK6 330 aaPredicted RBP14.27□□□□□ -0.13
EFNB1-201ENST00000204961 PRAMEF27A3QJZ7 478 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 FABP12A6NFH5 140 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 CASKO14936 926 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 HMGN2P05204 90 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ADH5P11766 374 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 IFI30P13284 250 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 PPIBP23284 216 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 TAS2R41P59536 307 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 TBRG1Q3YBR2 411 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 NDUFAF5Q5TEU4 345 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 GET4Q7L5D6 327 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 FBLIM1Q8WUP2 373 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 RAD51AP1Q96B01 352 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 TM4SF18Q96CE8 201 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 DTD2Q96FN9 168 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 PITX2Q99697 317 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 GIMAP4Q9NUV9 329 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 WSB2Q9NYS7 404 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 CORO2BQ9UQ03 480 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 TDRD6O60522 2096 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ISM1B1AKI9 464 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 NDUFS4O43181 175 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 DYRK3O43781 588 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 GMFGO60234 142 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ARAFP10398 606 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 MMP11P24347 488 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 SNRPNP63162 240 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 DUSP2Q05923 314 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 PIP5KL1Q5T9C9 394 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 PPP2R2DQ66LE6 453 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 FAM92BQ6ZTR7 304 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ZER1Q7Z7L7 766 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 KRT78Q8N1N4 520 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 OR52E4Q8NGH9 312 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 KLHL6Q8WZ60 621 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ZNF689Q96CS4 500 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 DCLRE1CQ96SD1 692 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 GABARAPL3Q9BY60 117 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 SERHL2Q9H4I8 314 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 FBXL12Q9NXK8 326 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 SSR3Q9UNL2 185 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 HEPACAM2A8MVW5 462 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 HMGN4O00479 90 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 MOSPD3O75425 235 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 SOD1P00441 154 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 HNRNPFP52597 415 aaKnown RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ZNF630Q2M218 657 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 C6orf132Q5T0Z8 1188 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 RANGRFQ9HD47 186 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 ZNF221Q9UK13 617 aa14.26□□□□□ -0.13
EFNB1-201ENST00000204961 GPR55Q9Y2T6 319 aaPredicted RBP14.26□□□□□ -0.13
EFNB1-201ENST00000204961 HAT1O14929 419 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 SLC16A5O15375 505 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 FCMRO60667 390 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 FKTNO75072 461 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 SLC35G4P0C7Q5 338 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 ADRB3P13945 408 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 RHCEP18577 417 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 PTX3P26022 381 aaPredicted RBP14.25□□□□□ -0.13
EFNB1-201ENST00000204961 INPP1P49441 399 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 MPP7Q5T2T1 576 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 KHDRBS2Q5VWX1 349 aaKnown RBP14.25□□□□□ -0.13
EFNB1-201ENST00000204961 BBS1Q8NFJ9 593 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 OR51L1Q8NGJ5 315 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 SMPDL3AQ92484 453 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 SUSD6Q92537 303 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 TIFAQ96CG3 184 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 SLC35G5Q96KT7 338 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 DHRS1Q96LJ7 313 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 DEC1Q9P2X7 70 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 PEX16Q9Y5Y5 336 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 ARHGEF17Q96PE2 2063 aaPredicted RBP14.25□□□□□ -0.13
EFNB1-201ENST00000204961 A0A1W2PP55 124 aa14.25□□□□□ -0.13
EFNB1-201ENST00000204961 PI15O43692 258 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms