RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CDK1P06493 297 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 OSMP13725 252 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 UGT2B7P16662 529 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MAGP20916 626 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CPN2P22792 545 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CHMP24386 653 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CD6P30203 668 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TLX1P31314 330 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 IFNA8P32881 189 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MC3RP41968 323 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 RABIFP47224 123 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 NUDT6P53370 316 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 AQP6Q13520 282 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MAPK11Q15759 364 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CTF1Q16619 201 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ALG11Q2TAA5 492 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TPRG1LQ5T0D9 272 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 UBE2UQ5VVX9 321 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TMEM92Q6UXU6 159 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PTCHD4Q6ZW05 846 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ABHD13Q7L211 337 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 C16orf62Q7Z3J2 963 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 VN1R4Q7Z5H5 301 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 TRIM73Q86UV7 250 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 GJD3Q8N144 294 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 LRRC25Q8N386 305 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 LINC00471Q8N535 108 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 KCT2Q8NC54 265 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 FAM46DQ8NEK8 389 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 NUP43Q8NFH3 380 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 OR9A2Q8NGT5 310 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 HMGB4Q8WW32 186 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 RERGQ96A58 199 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 YIPF6Q96EC8 236 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 OTUB1Q96FW1 271 aaPredicted RBP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 MSLNLQ96KJ4 702 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 PRRC1Q96M27 445 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 SERINC2Q96SA4 455 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CSF3RQ99062 836 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 C11orf16Q9NQ32 467 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 POT1Q9NUX5 634 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF226Q9NYT6 803 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 ACTR10Q9NZ32 417 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 FTSJ1Q9UET6 329 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.79□□□□□ -1.16
VAMP3-201ENST00000054666 CEP290O15078 2479 aa7.79□□□□□ -1.16
VAMP3-201ENST00000054666 A0A0J9YVX5 310 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FAM221BA6H8Z2 402 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 A6NCN8 305 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 EFCAB10A6NFE3 127 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 WASHC1A8K0Z3 465 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FAM227AF5H4B4 570 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TNFP01375 233 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ALPPP05187 535 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 LCKP06239 509 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CHRM4P08173 479 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CD36P16671 472 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 POLR2CP19387 275 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 PTGER1P34995 402 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 EMP3P54852 163 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 C21orf59P57076 290 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 OLR1P78380 273 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CEBPEQ15744 281 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 NDUFA9Q16795 377 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 DGUOKQ16854 277 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF750Q32MQ0 723 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TMEM31Q5JXX7 168 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FRMPD2BQ6IN97 320 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ZNF770Q6IQ21 691 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 C16orf87Q6PH81 154 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CASP12Q6UXS9 341 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 Q6ZSR6 202 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ADCK1Q86TW2 530 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ZBTB46Q86UZ6 589 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 C9orf43Q8TAL5 461 aaPredicted RBP7.78□□□□□ -1.16
VAMP3-201ENST00000054666 NR4A3Q92570 626 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 MS4A4EQ96PG1 132 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 FCRL4Q96PJ5 515 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 OR7D2Q96RA2 312 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 SIGLEC11Q96RL6 698 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 PINK1Q9BXM7 581 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 GSDMCQ9BYG8 508 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 AMBNQ9NP70 447 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 PALMDQ9NP74 551 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 ACAD8Q9UKU7 415 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CES1P1Q9UKY3 287 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 LIPT1Q9Y234 373 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 SPACA6W5XKT8 324 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 A0A1W2PRQ8 180 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 PRAMEF27A3QJZ7 478 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 OR6C74A6NCV1 312 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 DUXAA6NLW8 204 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 CLDN24A6NM45 220 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 C2orf74A8MZ97 194 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 PRAMEF26H0Y7S4 382 aa7.78□□□□□ -1.16
VAMP3-201ENST00000054666 TLR4O00206 839 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms