RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CA13Q8N1Q1 262 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 TANKQ92844 425 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF285Q96NJ3 590 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 MS4A4EQ96PG1 132 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 ACTRT3Q9BYD9 372 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 CALML5Q9NZT1 146 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 EPHA6Q9UF33 1036 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 NDRG4Q9ULP0 352 aaKnown RBP13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 SIT1Q9Y3P8 196 aa13.45□□□□□ -0.26
RTFDC1-201ENST00000023939 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 AGR2O95994 175 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ATP1B1P05026 303 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 BCKDHBP21953 392 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 POLR2IP36954 125 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 PRKAG1P54619 331 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CDH15P55291 814 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 GABARAPL2P60520 117 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 SIM1P81133 766 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CD47Q08722 323 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 WDR45BQ5MNZ6 344 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC44A2Q8IWA5 706 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 OR10G2Q8NGC3 310 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 NCSTNQ92542 709 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 TRNT1Q96Q11 434 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 OR7D2Q96RA2 312 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC38A3Q99624 504 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ERVMER34-1Q9H9K5 563 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 SEC14L3Q9UDX4 400 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 DSPPQ9NZW4 1301 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 A0A087WV62 115 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CCDC163A0A0D9SF12 145 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 SLC9B1P1A6NJY1 282 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CASC3O15234 703 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 HCRTR1O43613 425 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 PIAS2O75928 621 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 GPR75O95800 540 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CHRM4P08173 479 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ALPPL2P10696 532 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CRHBPP24387 322 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ELK4P28324 431 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CLK3P49761 638 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CDH12P55289 794 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 TPD52P55327 224 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 RAB38P57729 211 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 LTB4RQ15722 352 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 C14orf28Q4W4Y0 310 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF628Q5EBL2 1059 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 LAIR2Q6ISS4 152 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 HEPHL1Q6MZM0 1159 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 MFSD12Q6NUT3 480 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 PRSS41Q7RTY9 318 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 GALNT5Q7Z7M9 940 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 TSPYL5Q86VY4 417 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 TTC29Q8NA56 475 aaPredicted RBP13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 OR7G2Q8NG99 324 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ZNF566Q969W8 418 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 C16orf58Q96GQ5 468 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 MAGED4Q96JG8 741 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CD180Q99467 661 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 FEVQ99581 238 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 APOL4Q9BPW4 351 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 RIBC2Q9H4K1 309 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 ENAMQ9NRM1 1142 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 TMEM74BQ9NUR3 256 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 GIN1Q9NXP7 522 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 HCN4Q9Y3Q4 1203 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 CSNK1G3Q9Y6M4 447 aa13.44□□□□□ -0.26
RTFDC1-201ENST00000023939 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 SYT5O00445 386 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 FFAR1O14842 300 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 BCAT2O15382 392 aaPredicted RBP13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 GADD45GO95257 159 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CCDC159P0C7I6 412 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 PTGER1P34995 402 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 SOX18P35713 384 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 GABRA4P48169 554 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 AFF3P51826 1226 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 MAPK10P53779 464 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 SMIM11AP58511 58 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CXCR4P61073 352 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 SKP1P63208 163 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 OLR1P78380 273 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 NPRL3Q12980 569 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 RAPSNQ13702 412 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 EXOC3L2Q2M3D2 409 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CTU2Q2VPK5 515 aaKnown RBP13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 CNPY1Q3B7I2 92 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
RTFDC1-201ENST00000023939 FHL5Q5TD97 284 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms