RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CRYZQ08257 329 aaKnown RBP14.56□□□□□ -0.08
ERCC1-201ENST00000013807 MAP4K2Q12851 820 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 HSPB2Q16082 182 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 FBXL19-AS1Q494R0 122 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 NHSL2Q5HYW2 709 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 FNDC7Q5VTL7 733 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 TMEM198Q66K66 360 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 C8orf74Q6P047 294 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 PAGE2Q7Z2X7 111 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 GALNT12Q8IXK2 581 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 ULK2Q8IYT8 1036 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 METTL4Q8N3J2 472 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 TMEM151AQ8N4L1 468 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 PTGR2Q8N8N7 351 aaPredicted RBP14.56□□□□□ -0.08
ERCC1-201ENST00000013807 FAM13CQ8NE31 585 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 SPPL2AQ8TCT8 520 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 CDK15Q96Q40 435 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 GAL3ST4Q96RP7 486 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 OR10A5Q9H207 317 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 PRM3Q9NNZ6 103 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF358Q9NW07 568 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 FETUBQ9UGM5 382 aa14.56□□□□□ -0.08
ERCC1-201ENST00000013807 A0A1W2PS29 197 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 CDH16O75309 829 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 GBAP04062 536 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ATP1B1P05026 303 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 RPS17P08708 135 aaKnown RBP14.55□□□□□ -0.08
ERCC1-201ENST00000013807 CT62P0C5K7 136 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 CPMP14384 443 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 CNTFP26441 200 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 SERPINB9P50453 376 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 XKP51811 444 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 DUSP8Q13202 625 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 TSNAXIP1Q2TAA8 658 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 DOK4Q8TEW6 326 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 DIO2Q92813 273 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ATP6V1E2Q96A05 226 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 CTHRC1Q96CG8 243 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
ERCC1-201ENST00000013807 PHF21BQ96EK2 531 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF597Q96LX8 424 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 TIMP4Q99727 224 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 PRDM14Q9GZV8 571 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 VPS11Q9H270 941 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 EXO5Q9H790 373 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 BRF2Q9HAW0 419 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF639Q9UID6 485 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF180Q9UJW8 692 aa14.55□□□□□ -0.08
ERCC1-201ENST00000013807 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
ERCC1-201ENST00000013807 ACANP16112 2415 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 C1orf226A1L170 272 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 GUCY1B2O75343 617 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 CTAG2O75638 210 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 KLK1P06870 262 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 CD1EP15812 388 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 PORP16435 677 aaPredicted RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 SOX18P35713 384 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 CASP3P42574 277 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 CDK9P50750 372 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 NRG3P56975 720 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 FBXW4P57775 412 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 MGAT2Q10469 447 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 UAP1Q16222 522 aaPredicted RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 PRICKLE4Q2TBC4 344 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 UBAP2Q5T6F2 1119 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 VASNQ6EMK4 673 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 SLC48A1Q6P1K1 146 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 POMZP3Q6PJE2 187 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 ARSKQ6UWY0 536 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 PACS2Q86VP3 889 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 TMEM41AQ96HV5 264 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 RILPQ96NA2 401 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 MRPL57Q9BQC6 102 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 MRPL1Q9BYD6 325 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 SLC6A15Q9H2J7 730 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 CDC42EP4Q9H3Q1 356 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 ZNF629Q9UEG4 869 aaPredicted RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 MTRF1LQ9UGC7 380 aaKnown RBP14.54□□□□□ -0.08
ERCC1-201ENST00000013807 PCDHA9Q9Y5H5 950 aa14.54□□□□□ -0.08
ERCC1-201ENST00000013807 NIPBLQ6KC79 2804 aaeCLIP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ABCB1P08183 1280 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 INHBAP08476 426 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 SBK3P0C264 359 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 GPX3P22352 226 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ABCD3P28288 659 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 DNAJA1P31689 397 aaKnown RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 TRA2BP62995 288 aaKnown RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 GALNT1Q10472 559 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 IFT88Q13099 833 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 SNTA1Q13424 505 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 SF3B4Q15427 424 aaKnown RBP eCLIP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 ACSF3Q4G176 576 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 CCNYL2Q5T2Q4 361 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 HLA-DQA1Q5Y7H0 255 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 MILR1Q7Z6M3 343 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 LACC1Q8IV20 430 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 PM20D2Q8IYS1 436 aa14.53□□□□□ -0.08
ERCC1-201ENST00000013807 C17orf53Q8N3J3 647 aaPredicted RBP14.53□□□□□ -0.08
ERCC1-201ENST00000013807 LIX1Q8N485 282 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms