RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Dcun1d5Q9CXV9 237 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Stard5Q9EPQ7 213 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 AgtrapQ9WVK0 161 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 C4bP01029 1738 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ttc39aA2ACP1 578 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc22a28B2RT89 552 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sult2a6B2RVI8 285 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc9a5B2RXE2 898 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mthfd2lD3YZG8 338 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Spaca6E9Q8Q8 339 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 E2f3O35261 457 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pld3O35405 488 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 P01636 108 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tead3P70210 439 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pde7aP70453 456 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gjb5Q02739 271 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nlrc3Q5DU56 1064 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 C1qtnf6Q6IR41 264 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ip6k1Q6PD10 433 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ubtd2Q6PGH0 234 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 SnupnQ80W37 358 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 StgQ8BM15 349 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr63Q8VBW9 316 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Med17Q8VCD5 649 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Serpinb1bQ8VHP7 382 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Smim14Q91VT8 99 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc22a30Q96LX3 552 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Wdr73Q9CWR1 371 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 L3hypdhQ9CXA2 354 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc22a17Q9D9E0 401 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm30302A0A1Y7VN40 1110 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ackr2O08707 378 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ptpn20O55082 426 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pdha2P35487 391 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nr2f6P43136 390 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Col9a2Q07643 688 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mier2Q3U3N0 541 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sox17Q61473 419 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 DbhQ64237 622 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mea1Q64327 174 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rftn1Q6A0D4 554 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Csnka2ipQ8CH19 720 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pxdc1Q8JZU6 231 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rad51cQ924H5 366 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Thumpd1Q99J36 350 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mocs2Q9Z223 189 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ankrd34aB2RW11 495 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Zfp809G3X9G7 402 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr237-ps1K9J725 310 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 BckdkO55028 412 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Hoxb13P70321 286 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Art5P70352 309 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rps3aP97351 264 aaKnown RBP9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Bbs1Q3V3N7 593 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fam189bQ5HZJ5 669 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dyrk2Q5U4C9 599 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr814Q7TRH4 310 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Zc3hav1lQ8BFR1 296 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cox14Q8BH51 57 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Q8K039 155 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Plekhj1Q9D240 164 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 PlgrktQ9D3P8 147 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Enpp2Q9R1E6 862 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 H2afb1S4R1E0 115 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 H2afb3S4R1G7 115 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rhox2dW4VSN9 191 aa9.84□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fer1l6E0CZ42 1862 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Sipa1l3G3X9J0 1776 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r77E9PY60 306 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr605E9Q838 314 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 E030030I06RikJ3QML9 246 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gtf2h4O70422 463 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hoxa4P06798 285 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cd14P10810 366 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 FshrP35378 692 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Irs1P35569 1233 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bmpr1aP36895 532 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 TstP52196 297 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rnft2Q3UF64 445 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fgfr3Q61851 801 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lcn3Q62471 182 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Npr2Q6VVW5 1047 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mrpl48Q8JZS9 211 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pafah2Q8VDG7 390 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr109Q8VG96 314 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lrch4Q921G6 680 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Bcl7aQ9CXE2 210 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Snx20Q9D2Y5 313 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mfsd2aQ9DA75 534 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 BvesQ9ES83 358 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr839-ps1A0A1D5RMH6 312 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr1215A3KGY3 312 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm3099J3QPA5 205 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Alkal1J3QPP8 127 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 UgdhO70475 493 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Hephl1Q3V1H3 1159 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dcaf13Q6PAC3 445 aaKnown RBP9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Uhrf2Q7TMI3 803 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Znf32Q80V23 272 aa9.83□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ramp2Q9WUP0 189 aa9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms