RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gsk3aQ2NL51 490 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Ctu2Q3U308 514 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Spin1Q61142 262 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Cyp1b1Q64429 543 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 AptxQ7TQC5 342 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tmem200aQ8C817 491 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Teddm1bQ8CC62 306 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Vmn1r192Q8K4C9 300 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr771Q8VFH6 317 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1414Q8VGU5 312 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr572Q8VGZ3 318 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc3a1Q91WV7 685 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Tram2Q924Z5 370 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Fam174aQ9D3L0 190 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Chrm3Q9ERZ3 589 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Znf207Q9JMD0 495 aaKnown RBP12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Slc25a13Q9QXX4 676 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Foxe3Q9QY14 288 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1508Q9R0K4 310 aa12.78□□□□□ -0.36
Nup88-201ENSMUST00000035283 Olfr1032A2ATE5 310 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm10338K7N692 204 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gosr2O35166 212 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ntf3P20181 258 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Rps25P62852 125 aaKnown RBP12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gng2P63213 71 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Myl12bQ3THE2 172 aaKnown RBP12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tas2r38Q7TQA6 331 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr728Q7TRM6 311 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 ToporsQ80Z37 1033 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Efemp1Q8BPB5 493 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Kiaa1671Q8BRV5 308 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 ExogQ8C163 368 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1387Q8VFA9 311 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr170Q8VGL6 313 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hspa14Q99M31 509 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Bud23Q9CY21 281 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ankrd7Q9D504 279 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dnase1l1Q9D7J6 314 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tor3aQ9ER38 385 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Zbtb32Q9JKD9 465 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc9a5B2RXE2 898 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr891E9Q843 316 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 IlkO55222 452 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Hoxd8P23463 289 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 OcmP51879 109 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 PtpaP58389 323 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Tbpl1P62340 186 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Bod1Q5SQY2 173 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mal2Q8BI08 175 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Lrrtm3Q8BZ81 582 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Csnk1g3Q8C4X2 424 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Sidt2Q8CIF6 832 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Eml3Q8VC03 897 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 EdaraddQ8VHX2 208 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cxxc5Q91WA4 317 aaKnown RBP12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Oosp1Q925U0 202 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gpr146Q99LE2 333 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Clcc1Q99LI2 539 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Osbpl3Q9DBS9 855 aa12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 Dnajb1Q9QYJ3 340 aaKnown RBP12.77□□□□□ -0.37
Nup88-201ENSMUST00000035283 TomtA1Y9I9 258 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr742A2RTP5 311 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 PtgdsO09114 189 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 FhitO89106 150 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 MbpP04370 250 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Cdk1P11440 297 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 F9P16294 471 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 ThpoP40226 356 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Adamts8P57110 905 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Arpc4P59999 168 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Foxr1Q3UTB7 268 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pydc3Q3V3Q4 588 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Slc29a2Q61672 456 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Trim46Q7TNM2 759 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Fam109aQ8BH49 266 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 4933430I17RikQ8BHW4 495 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 E330021D16RikQ8BW45 371 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Nudt6Q8CH40 313 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 FlcnQ8QZS3 579 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ntng1Q8R4G0 539 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr1052Q8VGR8 312 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr668Q8VGW3 318 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Pskh1Q91YA2 424 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mrgprb4Q91ZC0 321 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 SdhcQ9CZB0 169 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ppil1Q9D0W5 166 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Eef1e1Q9D1M4 174 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Mrpl19Q9D338 292 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ift46Q9DB07 301 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Prkar1aQ9DBC7 381 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Ccdc107Q9DCC3 242 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Scamp4Q9JKV5 230 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 RbpmsQ9WVB0 197 aaKnown RBP12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm15013V9GWY0 266 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 A0A286YDM2 672 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Gm6710A2ART0 554 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Olfr59B1ARL3 323 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 4930444G20RikD3Z741 495 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Apoc3P33622 99 aa12.76□□□□□ -0.37
Nup88-201ENSMUST00000035283 Aup1P70295 410 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms