RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Vps9d1Q8C190 649 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gulp1Q8K2A1 304 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Chrna3Q8R4G9 499 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gtf2h3Q8VD76 309 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr700Q8VFM5 316 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr853Q8VGG6 305 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr1Q8VGI1 314 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vsx1Q91V10 363 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rnf167Q91XF4 347 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rnf144aQ925F3 292 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 LipfQ9CPP7 395 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zdhhc13Q9CWU2 622 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Exosc7Q9D0M0 291 aaKnown RBP12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hcar2Q9EP66 360 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn1r52Q9EP79 309 aa12.06□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr1375A0A0N4SUP0 313 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 A0A286YDU1 74 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam209A2APA5 170 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Il20rbE9Q9A6 308 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc27a6E9Q9W4 619 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gm21800J3QMJ9 180 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gcm2O09102 504 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Capns1O88456 269 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nsg2P47759 171 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 IduaP48441 634 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 StsP50427 624 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 DbtP53395 482 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Taar2Q5QD17 339 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Slc39a10Q6P5F6 833 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr728Q7TRM6 311 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fbxl22Q8C7B6 236 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 LzicQ8K3C3 190 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Osgin1Q8VC10 478 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Adgre4Q91ZE5 689 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tram2Q924Z5 370 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ndufs4Q9CXZ1 175 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pop7Q9DCH2 140 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr44Q9EQB8 314 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 PolmQ9JIW4 496 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ak4Q9WUR9 223 aaKnown RBP12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Shisa8J3QNX5 399 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Nudt19P11930 357 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zscan26Q5RJ54 466 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pan3Q640Q5 837 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zik1Q80YP6 463 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mfn1Q811U4 741 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fbxo30Q8BJL1 746 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cnot2Q8C5L3 540 aaKnown RBP12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Mptx1Q8R1M8 219 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr622Q8VGY7 317 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr586Q8VH13 317 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zswim7Q9CWQ2 152 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ift27Q9D0P8 186 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hspb11Q9D6H2 143 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 PrelpQ9JK53 378 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Hspb3Q9QZ57 154 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ramp2Q9WUP0 189 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Loxl3Q9Z175 754 aa12.05□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn2r102L7N279 857 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cdc25bP30306 576 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Serpind1P49182 478 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gdi1P50396 447 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Cdc42P60766 191 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 SgcdP82347 289 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Scn1bP97952 218 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tgtp2Q3T9E4 415 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tgtp1Q62293 415 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Zc3h14Q8BJ05 735 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 PstkQ8BP74 359 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Trmt10aQ8C1Z8 328 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 ItpaQ9D892 198 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Wwp2Q9DBH0 870 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tnfrsf25B1AWN9 411 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr287E9PZS7 322 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gtpbp1O08582 668 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 KeraO35367 351 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gja4P28235 333 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 AcadlP51174 430 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 JupQ02257 745 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Fam98aQ3TJZ6 515 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Rars2Q3U186 578 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Chsy3Q5DTK1 884 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Serpinf2Q61247 491 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Lpcat4Q6NVG1 524 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr744Q7TRM0 323 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Gstm7Q80W21 218 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pced1bQ8BGX1 433 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 NarsQ8BP47 559 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Q8C0X8 640 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Steap3Q8CI59 488 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ddx52Q8K301 598 aaKnown RBP12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Vmn1r75Q8R289 305 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Pex12Q8VC48 359 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Dapk2Q8VDF3 370 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr868Q8VFI8 309 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Olfr818Q8VG46 318 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Atp6v1g1Q9CR51 118 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Tlr4Q9QUK6 835 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Srpk3Q9Z0G2 565 aa12.04□□□□□ -0.48
Rnf4-201ENSMUST00000030992 Ssc4dA1L0T3 586 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms