RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 HNRNPCL1O60812 293 aaKnown RBP16.35■□□□□ 0.21
PHGDH-230ENST00000641927 KLF7O75840 302 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-230ENST00000641927 RAB40ALP0C0E4 278 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 MC3RP41968 323 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 PGDP52209 483 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 RPS18P62269 152 aaKnown RBP16.35■□□□□ 0.21
PHGDH-230ENST00000641927 DNASE1L3Q13609 305 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 ANGPTL8Q6UXH0 198 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 DLEU7Q6UYE1 221 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 C7orf57Q8NEG2 295 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 NKD1Q969G9 470 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 VAPAQ9P0L0 249 aa16.35■□□□□ 0.21
PHGDH-230ENST00000641927 CCDC88CQ9P219 2028 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 LOC101059948A0A1B0GTJ6 334 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 GYG2O15488 501 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 NPPAP01160 153 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 CHI3L1P36222 383 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 OR4D2P58180 307 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 GAB1Q13480 694 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 TGIF1Q15583 401 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 C16orf89Q6UX73 402 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 DGAT2L6Q6ZPD8 337 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 GOT1L1Q8NHS2 421 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 AURKBQ96GD4 344 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 CGREF1Q99674 301 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 SLC35A5Q9BS91 424 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ANKRA2Q9H9E1 313 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 SIRT3Q9NTG7 399 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 DDX18Q9NVP1 670 aaKnown RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 NDE1Q9NXR1 346 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 SLC25A37Q9NYZ2 338 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ACSL6Q9UKU0 697 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 TCFL5Q9UL49 500 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 CLCA3PQ9Y6N3 262 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 RNF103-CHMP3A0A140T963 221 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 C17orf105B2RV13 164 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 C21orf140B9A014 251 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 DYRK3O43781 588 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 UMODP07911 640 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 UQCRC2P22695 453 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 PRKAG1P54619 331 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 PRICKLE4Q2TBC4 344 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ZNF628Q5EBL2 1059 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 LRIF1Q5T3J3 769 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 FAM111BQ6SJ93 734 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ANKRD37Q7Z713 158 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 DEFB107AQ8IZN7 70 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ELP4Q96EB1 424 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ZNF578Q96N58 590 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 CNPPD1Q9BV87 410 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 GPR87Q9BY21 358 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 TRIM8Q9BZR9 551 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 CXorf21Q9HAI6 301 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 C3orf14Q9HBI5 128 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ADAP2Q9NPF8 381 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 ZCCHC3Q9NUD5 404 aaKnown RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 TAS2R1Q9NYW7 299 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
PHGDH-230ENST00000641927 C19orf25Q9UFG5 118 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-230ENST00000641927 IGHV3-20A0A0C4DH32 117 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 SYNDIG1LA6NDD5 238 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 FXYD1O00168 92 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 LIPCP11150 499 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 PTPN4P29074 926 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 PTPN6P29350 595 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 CCT3P49368 545 aaKnown RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 PSME3P61289 254 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 TP53BP2Q13625 1128 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 ZNF267Q14586 743 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 ELAVL1Q15717 326 aaKnown RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 TRMT12Q53H54 448 aaKnown RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 SFT2D3Q587I9 215 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 CPZQ66K79 652 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 DTX1Q86Y01 620 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 MSRB3Q8IXL7 192 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 VWA5B2Q8N398 1253 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 OR7G2Q8NG99 324 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 PNPT1Q8TCS8 783 aaKnown RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 KIAA1143Q96AT1 154 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 C8orf44Q96CB5 159 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 SLC7A6OSQ96CW6 309 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 HOPXQ9BPY8 73 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 MESP1Q9BRJ9 268 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 BTBD10Q9BSF8 475 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 THUMPD3Q9BV44 507 aaKnown RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 TMEM121BQ9BXQ6 578 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 GPN2Q9H9Y4 310 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-230ENST00000641927 KCND3Q9UK17 655 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 NEUROG3Q9Y4Z2 214 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 SPTBN2O15020 2390 aa16.33■□□□□ 0.2
PHGDH-230ENST00000641927 CYC1P08574 325 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 CT62P0C5K7 136 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 ZCCHC18P0CG32 403 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 F8A1P23610 371 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 OTX2P32243 289 aa16.32■□□□□ 0.2
PHGDH-230ENST00000641927 CPOXP36551 454 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms