RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SYT16Q17RD7 645 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 CYBRD1Q53TN4 286 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 EPHX4Q8IUS5 362 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 NUP43Q8NFH3 380 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 OR7G2Q8NG99 324 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 NAT6Q93015 286 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 MMABQ96EY8 250 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 C16orf58Q96GQ5 468 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 PEX11GQ96HA9 241 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 NAF1Q96HR8 494 aaKnown RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 HSH2DQ96JZ2 352 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SLC29A1Q99808 456 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 YIPF4Q9BSR8 244 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 NTN4Q9HB63 628 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TRPC4Q9UBN4 977 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 CNOT11Q9UKZ1 510 aaKnown RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 ANGPT4Q9Y264 503 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 M0QX08 132 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 UPK1AO00322 258 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TOX3O15405 576 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 DEAF1O75398 565 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 CPNE6O95741 557 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SEMG1P04279 462 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 BCHEP06276 602 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 HOXB6P17509 224 aaKnown RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SOX18P35713 384 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 MAPK11Q15759 364 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 PROX2Q3B8N5 592 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TCEAL6Q6IPX3 200 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 REEP3Q6NUK4 255 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 SLC30A8Q8IWU4 369 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TCEAL3Q969E4 200 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TAMM41Q96BW9 452 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 OTUB1Q96FW1 271 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-209ENST00000641074 TPD52L3Q96J77 140 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 VPS50Q96JG6 964 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 BDH2Q9BUT1 245 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 LRRN3Q9H3W5 708 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 CUTCQ9NTM9 273 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 ADPRHL2Q9NX46 363 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 OAZ3Q9UMX2 235 aa17.12■□□□□ 0.33
PHGDH-209ENST00000641074 PRAMEF27A3QJZ7 478 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 PLOD2O00469 737 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 SOCS2O14508 198 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 SUV39H1O43463 412 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 PRSS23O95084 383 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 OPN1SWP03999 348 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 ATP1B1P05026 303 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 MSL3P1P0C860 447 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 CKMT1AP12532 417 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 MAGEA2P43356 314 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 MAGEA8P43361 318 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 KHKP50053 298 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 NRF1Q16656 503 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 FAM214AQ32MH5 1076 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.336e-6■■■■□ 21.1
PHGDH-209ENST00000641074 ZNF628Q5EBL2 1059 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 CRB2Q5IJ48 1285 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 ZBTB49Q6ZSB9 765 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 FKBP9P1Q75LS8 142 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 MIPOL1Q8TD10 442 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 XAGE5Q8WWM1 108 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 VCXQ9H320 206 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 CLK4Q9HAZ1 481 aaKnown RBP17.11■□□□□ 0.33
PHGDH-209ENST00000641074 DDX18Q9NVP1 670 aaKnown RBP17.11■□□□□ 0.33
PHGDH-209ENST00000641074 THUMPD1Q9NXG2 353 aaKnown RBP17.11■□□□□ 0.33
PHGDH-209ENST00000641074 NTMQ9P121 344 aa17.11■□□□□ 0.33
PHGDH-209ENST00000641074 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 C5orf58C9J3I9 102 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 H0YIG0 161 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 PDLIM1O00151 329 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 ACOX3O15254 700 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 CST1P01037 141 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 SELENOWP63302 87 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 RPS26P11Q5JNZ5 115 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-209ENST00000641074 PRAMEF17Q5VTA0 474 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 FAM111BQ6SJ93 734 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 TTLL10Q6ZVT0 673 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 ZDHHC21Q8IVQ6 265 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 SIMC1Q8NDZ2 872 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 OR4D9Q8NGE8 314 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 GIMAP5Q96F15 307 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 LOXL4Q96JB6 756 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 DOHHQ9BU89 302 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 IL1RAPQ9NPH3 570 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 EQTNQ9NQ60 294 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 PDP2Q9P2J9 529 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 DNAJB9Q9UBS3 223 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 R4GN57 208 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 ZNF749O43361 778 aa17.1■□□□□ 0.33
PHGDH-209ENST00000641074 NME6O75414 186 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-209ENST00000641074 PGM3O95394 542 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms