RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ITM2CQ9NQX7 267 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 GTF2A1LQ9UNN4 478 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 PCDHGC4Q9Y5F7 938 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 TTC24A2A3L6 582 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-227ENST00000640648 CRYABP02511 175 aaKnown RBP7.92□□□□□ -1.14
NECAP1-227ENST00000640648 CATP04040 527 aaKnown RBP7.92□□□□□ -1.14
NECAP1-227ENST00000640648 ALDOBP05062 364 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 CSF1P09603 554 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 RFC3P40938 356 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 MC3RP41968 323 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 CLCN4P51793 760 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 CLCNKAP51800 687 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 REEP5Q00765 189 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 TAF10Q12962 218 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 MICAQ29983 383 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 TMEM41BQ5BJD5 291 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 SAPCD1Q5SSQ6 148 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF697Q5TEC3 545 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 PLAG1Q6DJT9 500 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 SLC27A4Q6P1M0 643 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 DOK6Q6PKX4 331 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 HFE2Q6ZVN8 426 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 NDUFAF7Q7L592 441 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 ARL14Q8N4G2 192 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 OR6C4Q8NGE1 309 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 PIGXQ8TBF5 258 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 TANKQ92844 425 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 PSMG2Q969U7 264 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 THAP7Q9BT49 309 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-227ENST00000640648 SRRQ9GZT4 340 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 ATG5Q9H1Y0 275 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 AKTIPQ9H8T0 292 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 UCK1Q9HA47 277 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 ASF1BQ9NVP2 202 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 SCML1Q9UN30 329 aa7.92□□□□□ -1.14
NECAP1-227ENST00000640648 RGPD2P0DJD1 1756 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF587BE7ETH6 402 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 NPIPA2E9PIF3 369 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 TRIM77I1YAP6 450 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 M0R143 59 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 MATN3O15232 486 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 PRODHO43272 600 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ALDH1A2O94788 518 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 CLIC3O95833 236 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 GOT2P00505 430 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 COL6A1P12109 1028 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 PRPS1L1P21108 318 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ITPKAP23677 461 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 EPHA4P54764 986 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 CTAG1AP78358 180 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 EXOSC2Q13868 293 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 SNTB1Q13884 538 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 XKR6Q5GH73 641 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 TMEM81Q6P7N7 255 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF783Q6ZMS7 281 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 TAS1R3Q7RTX0 852 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 TIPARPQ7Z3E1 657 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 SCAMP5Q8TAC9 235 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 HMCESQ96FZ2 354 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 FAM120CQ9NX05 1096 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 NOP16Q9Y3C1 178 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 MAGEB17A8MXT2 336 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 TBL1XO60907 577 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 MT-ND4LP03901 98 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 MMP3P08254 477 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 DGKGP49619 791 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 DLK1P80370 383 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 RELQ04864 619 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 INCA1Q0VD86 236 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 GPR50Q13585 617 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 C3orf38Q5JPI3 329 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 GPR139Q6DWJ6 353 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 CNIH2Q6PI25 160 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 GPAT4Q86UL3 456 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 FOXRED2Q8IWF2 684 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 OR7D4Q8NG98 312 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 PGAP3Q96FM1 320 aaPredicted RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF559Q9BR84 538 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 NXF2Q9GZY0 626 aaKnown RBP7.91□□□□□ -1.14
NECAP1-227ENST00000640648 SLC25A51Q9H1U9 297 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 KCNH6Q9H252 994 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ASAH2Q9NR71 780 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 KLHL42Q9P2K6 505 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 GIMAP2Q9UG22 337 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 SLC2A6Q9UGQ3 507 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ROBO1Q9Y6N7 1651 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 A0A096LPI6 279 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 BTBD17A6NE02 478 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ZNF670-ZNF695F2Z2N8 137 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ARNTLO00327 626 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 C22orf31O95567 290 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 AHSGP02765 367 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 MAKP20794 623 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 CLCN7P51798 805 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 NUDT6P53370 316 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 CDK3Q00526 305 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 DUSP28Q4G0W2 176 aa7.91□□□□□ -1.14
NECAP1-227ENST00000640648 ZMAT1Q5H9K5 638 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms