RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OR1N1Q8NGS0 311 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 KAT2AQ92830 837 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 MTERF3Q96E29 417 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF764Q96H86 408 aaPredicted RBP12.29□□□□□ -0.44
GTF3A-209ENST00000640289 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 NPAS2Q99743 824 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 CCDC28BQ9BUN5 200 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 TMEM120AQ9BXJ8 343 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 PTGFRNQ9P2B2 879 aa12.29□□□□□ -0.44
GTF3A-209ENST00000640289 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 CFAP47Q6ZTR5 3102 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 MKRN2OSH3BPM6 223 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 DYRK3O43781 588 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 TROVE2P10155 538 aaKnown RBP eCLIP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 IDO1P14902 403 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 PCSK2P16519 638 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 S1PR1P21453 382 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 MPIP34949 423 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ST13P50502 369 aaKnown RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 SEC24CP53992 1094 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 C21orf58P58505 322 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 GNGT1P63211 74 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 MAP4K2Q12851 820 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 KCNAB2Q13303 367 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 LY6DQ14210 128 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 EXOSC7Q15024 291 aaKnown RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 PGS1Q32NB8 556 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF628Q5EBL2 1059 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 CPTPQ5TA50 214 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 IRAK1BP1Q5VVH5 260 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 JMJD6Q6NYC1 403 aaPredicted RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ZNF551Q7Z340 670 aaPredicted RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 C9orf40Q8IXQ3 194 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 FAM9CQ8IZT9 166 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 VWA5B2Q8N398 1253 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 THAP3Q8WTV1 239 aaPredicted RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 FBXL20Q96IG2 436 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ART5Q96L15 291 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 AMDHD1Q96NU7 426 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 SEMA4CQ9C0C4 833 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ANKRA2Q9H9E1 313 aa12.28□□□□□ -0.44
GTF3A-209ENST00000640289 LIN28AQ9H9Z2 209 aaKnown RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ZBTB20Q9HC78 741 aaPredicted RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 PCDHGA9Q9Y5G4 932 aaKnown RBP12.28□□□□□ -0.44
GTF3A-209ENST00000640289 ANKRD11Q6UB99 2663 aaPredicted RBP12.27□□□□□ -0.44
GTF3A-209ENST00000640289 TMEM200CA6NKL6 621 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 CBX7O95931 251 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 LSP1P33241 339 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 SOX11P35716 441 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 SLC37A1P57057 533 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 AP2B1P63010 937 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 FUT7Q11130 342 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 HSPB3Q12988 150 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 DUSP8Q13202 625 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 RPS6KA2Q15349 733 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 GSTA3Q16772 222 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 PDCD4Q53EL6 469 aaKnown RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 SPANXN4Q5MJ08 99 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 AGAP7PQ5VUJ5 663 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 OR4F3Q6IEY1 312 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 H3F3CQ6NXT2 135 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 PAOXQ6QHF9 649 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 RNF111Q6ZNA4 994 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 C16orf47Q6ZP98 133 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 LINC00696Q6ZRV3 163 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 OR7G2Q8NG99 324 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 OR9I1Q8NGQ6 314 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF675Q8TD23 568 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 COQ8BQ96D53 544 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 RILPQ96NA2 401 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 AGAP4Q96P64 663 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 PRPF18Q99633 342 aaKnown RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 SMAD5Q99717 465 aaKnown RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 SIKE1Q9BRV8 207 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 DUSP26Q9BV47 211 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 OR10A5Q9H207 317 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 CDCP1Q9H5V8 836 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 CLMPQ9H6B4 373 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
GTF3A-209ENST00000640289 COPS7AQ9UBW8 275 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 ZNF639Q9UID6 485 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 TP53TG5Q9Y2B4 290 aa12.27□□□□□ -0.45
GTF3A-209ENST00000640289 A0A1W2PRB8 838 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 NME6O75414 186 aaPredicted RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 MC3RP41968 323 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ZFP36L2P47974 494 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 CDK9P50750 372 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 ARFIP2P53365 341 aa12.26□□□□□ -0.45
GTF3A-209ENST00000640289 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 MANFP55145 182 aaKnown RBP12.26□□□□□ -0.45
GTF3A-209ENST00000640289 WNT3P56703 355 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms