RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HSDL2Q6YN16 418 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF765Q7L2R6 523 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF547Q8IVP9 402 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 IQCF1Q8N6M8 205 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 GDPD1Q8N9F7 314 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 OR2L2Q8NH16 312 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 GDF15Q99988 308 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 TREX2Q9BQ50 279 aaPredicted RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ABCG4Q9H172 646 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ABCB9Q9NP78 766 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 P2RX2Q9UBL9 471 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 SNX7Q9UNH6 387 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ASF1AQ9Y294 204 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 K7ESM1 405 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 RTCAO00442 366 aaKnown RBP19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 KPNA3O00505 521 aaPredicted RBP19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 PLD2O14939 933 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 SEC14L5O43304 696 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 GPR1P46091 355 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 TGM4P49221 684 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 MXD1Q05195 221 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 HYAL2Q12891 473 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 NFE2L1Q14494 772 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 C3orf38Q5JPI3 329 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 RAET1GQ6H3X3 334 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 PODNL1Q6PEZ8 512 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 UTS2BQ765I0 119 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 C17orf64Q86WR6 236 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 NUS1Q96E22 293 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 TCEAL4Q96EI5 215 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 F2RL3Q96RI0 385 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 WFDC6Q9BQY6 131 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 MVB12BQ9H7P6 319 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 PELI2Q9HAT8 420 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 GPR34Q9UPC5 381 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 KIAA1549LQ6ZVL6 1849 aa19.04■□□□□ 0.64
SYNGAP1-227ENST00000638142 STK25O00506 426 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ACADMP11310 421 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLC9A3P48764 834 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 RACK1P63244 317 aaKnown RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 HNRNPA0Q13151 305 aaKnown RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 PIN1Q13526 163 aaPredicted RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 TRIM60Q495X7 471 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 KLHL22Q53GT1 634 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 TBC1D19Q8N5T2 526 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 PSD4Q8NDX1 1056 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 LRR1Q96L50 414 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 AIF1LQ9BQI0 150 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 TMEM246Q9BRR3 403 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 MED18Q9BUE0 208 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ACAT2Q9BWD1 397 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 MIXL1Q9H2W2 232 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 MARK1Q9P0L2 795 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 SPINT1O43278 529 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 PAPLNO95428 1278 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 GNRH1P01148 92 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 MSL3P1P0C860 447 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ETV5P41161 510 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 GIPRP48546 466 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 CCT3P49368 545 aaKnown RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ETV1P50549 477 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 NOGQ13253 232 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 GINS1Q14691 196 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 TEAD2Q15562 447 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 TAB1Q15750 504 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 DDI2Q5TDH0 399 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ANKRD33Q7Z3H0 272 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF366Q8N895 744 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 KIAA1143Q96AT1 154 aaPredicted RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF582Q96NG8 517 aaPredicted RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 FNDC11Q9BVV2 318 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 ACSS1Q9NUB1 689 aaPredicted RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 PLEKHB1Q9UF11 243 aaPredicted RBP19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 PLXND1Q9Y4D7 1925 aa19.03■□□□□ 0.64
SYNGAP1-227ENST00000638142 A0A1W2PQL4 384 aaPredicted RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 CCDC182A6NF36 153 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 FABP12A6NFH5 140 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 MYL12AP19105 171 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 MMP11P24347 488 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 WNT4P56705 351 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 CHRNEQ04844 493 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ATAT1Q5SQI0 421 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 C22orf42Q6IC83 251 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 LAPTM4BQ86VI4 370 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 C2orf73Q8N5S3 287 aaPredicted RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 OR4K5Q8NGD3 323 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 EXOSC8Q96B26 276 aaKnown RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 VWCEQ96DN2 955 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 RNF170Q96K19 258 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 DMRTB1Q96MA1 342 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 KCTD7Q96MP8 289 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 OR52A5Q9H2C5 316 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 SERHL2Q9H4I8 314 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLA2Q9H6Q3 261 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZSCAN32Q9NX65 697 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 PLAGL1Q9UM63 463 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 NUP210Q8TEM1 1887 aaPredicted RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 IRGMA1A4Y4 181 aa19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 A8MV72 311 aaPredicted RBP19.02■□□□□ 0.64
SYNGAP1-227ENST00000638142 ADH1AP07327 375 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms