RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 TPD52L3Q96J77 140 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 SLC6A18Q96N87 628 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 SMOQ99835 787 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 NTMT1Q9BV86 223 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 CHST8Q9H2A9 424 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 SDHAF3Q9NRP4 125 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 UXTQ9UBK9 157 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-221ENST00000638141 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
CAPN3-221ENST00000638141 HHLA1C9JL84 531 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 MANBAO00462 879 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SDC3O75056 442 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 RAB36O95755 333 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ACAA1P09110 424 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 USP17L7P0C7H9 530 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SMPD1P17405 629 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 CXCL2P19875 107 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 GALP22466 123 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 TTPAP49638 278 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ZNF140P52738 457 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 RPS25P62851 125 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SPIBQ01892 262 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 DSC2Q02487 901 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 FGL2Q14314 439 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 LY6KQ17RY6 165 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 CRTC2Q53ET0 693 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 XKR4Q5GH76 650 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 DGKKQ5KSL6 1271 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 C12orf73Q69YU5 71 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 RAET1GQ6H3X3 334 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SPICQ8N5J4 248 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SYT14Q8NB59 555 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 OR5M3Q8NGP4 307 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 HSD17B8Q92506 261 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 DDX31Q9H8H2 851 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 EVPLQ92817 2033 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 IRGMA1A4Y4 181 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ADAM12O43184 909 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SGCEO43556 437 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ITGA10O75578 1167 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 AQP8O94778 261 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 HPP00738 406 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 THP07101 528 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SRSF11Q05519 484 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ITKQ08881 620 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 PUM1Q14671 1186 aaKnown RBP eCLIP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 TAF1AQ15573 450 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 IFI44LQ53G44 452 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 CCDC157Q569K6 752 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 MDGA1Q8NFP4 955 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 OR8J1Q8NGP2 316 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 OR5M9Q8NGP3 310 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ADAMTS19Q8TE59 1207 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ZDHHC1Q8WTX9 485 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 POF1BQ8WVV4 589 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 KCTD12Q96CX2 325 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 C1GALT1C1Q96EU7 318 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 PTDSS2Q9BVG9 487 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 TINAGL1Q9GZM7 467 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 PRDM9Q9NQV7 894 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 FAM120CQ9NX05 1096 aaKnown RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 EXTL2Q9UBQ6 330 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 RAI2Q9Y5P3 530 aa11.41□□□□□ -0.58
CAPN3-221ENST00000638141 SPIN1Q9Y657 262 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-221ENST00000638141 LOC105369274A0A096LPK9 316 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 MCRIP1C9JLW8 97 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 AGRPO00253 132 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SULT1C2O00338 296 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RAD1O60671 282 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 PAGE1O75459 146 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RP2O75695 350 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 NR2F6P10588 404 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 PPP3CBP16298 524 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ITGB8P26012 769 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 STARP49675 285 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ZNF157P51786 506 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 CDH12P55289 794 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 C21orf58P58505 322 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ILKQ13418 452 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 PTPRCAPQ14761 206 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 CHRNA6Q15825 494 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 PTPRNQ16849 979 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 FAM109BQ6ICB4 259 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 OR4N4Q8N0Y3 316 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 C12orf45Q8N5I9 185 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 WDR20Q8TBZ3 569 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 GANCQ8TET4 914 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ORAI1Q96D31 301 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 ELMOD3Q96FG2 381 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 MRPL48Q96GC5 212 aaKnown RBP11.4□□□□□ -0.58
CAPN3-221ENST00000638141 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 SPATA33Q96N06 139 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 TOX2Q96NM4 488 aa11.4□□□□□ -0.58
CAPN3-221ENST00000638141 OR4K3Q96R72 315 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms