RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DPY19L1Q2PZI1 675 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 BTBD16Q32M84 506 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 PGS1Q32NB8 556 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 C6orf163Q5TEZ5 329 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 PAOXQ6QHF9 649 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 APLFQ8IW19 511 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 GALNT12Q8IXK2 581 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 NATD1Q8N6N6 113 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 AMER2Q8N7J2 671 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 CLEC1AQ8NC01 280 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 GLB1L3Q8NCI6 653 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 B3GNT7Q8NFL0 401 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 M1APQ8TC57 530 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 DOK4Q8TEW6 326 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 ZBED6CLQ96FA7 236 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 SENP5Q96HI0 755 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 FBXL20Q96IG2 436 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 DUSP26Q9BV47 211 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 BHLHE41Q9C0J9 482 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 ING2Q9H160 280 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 GLIPR2Q9H4G4 154 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 RABEP2Q9H5N1 569 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 PRORYQ9H606 182 aa14.92□□□□□ -0.02
CLN6-216ENST00000636876 ACSS1Q9NUB1 689 aaPredicted RBP14.92□□□□□ -0.02
CLN6-216ENST00000636876 C9JVG2 144 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 SERPINA7P05543 415 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 CELA2AP08217 269 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 CT62P0C5K7 136 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 S100A3P33764 101 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 PTGER1P34995 402 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 KIR3DL1P43629 444 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 GPR143P51810 404 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 AP2B1P63010 937 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 MGAT2Q10469 447 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 MAP4K2Q12851 820 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 PRICKLE4Q2TBC4 344 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 SPANXN4Q5MJ08 99 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ZNF551Q7Z340 670 aaPredicted RBP14.91□□□□□ -0.02
CLN6-216ENST00000636876 KBTBD2Q8IY47 623 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 VWA5B2Q8N398 1253 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 APCDD1LQ8NCL9 501 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ADCY4Q8NFM4 1077 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 OR8J2Q8NGG1 315 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 OR9I1Q8NGQ6 314 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 OR1N1Q8NGS0 311 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 OR9A2Q8NGT5 310 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ZFP28Q8NHY6 868 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 SLC2A12Q8TD20 617 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ZNF675Q8TD23 568 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 APOBEC4Q8WW27 367 aaKnown RBP14.91□□□□□ -0.02
CLN6-216ENST00000636876 NCLNQ969V3 563 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ART5Q96L15 291 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 OR8D2Q9GZM6 311 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 MMP25Q9NPA2 562 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 MAT2BQ9NZL9 334 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ERVK-19Q9WJR5 959 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 ATMQ13315 3056 aa14.91□□□□□ -0.02
CLN6-216ENST00000636876 SMG1Q96Q15 3661 aaKnown RBP14.9□□□□□ -0.02
CLN6-216ENST00000636876 DOCK10Q96BY6 2186 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 A0A1W2PRB8 838 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 FAM234BA2RU67 622 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 HRKO00198 91 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 IGKV3-11P04433 115 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 EFNA1P20827 205 aaPredicted RBP14.9□□□□□ -0.02
CLN6-216ENST00000636876 SOX18P35713 384 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ZFP36L2P47974 494 aaKnown RBP14.9□□□□□ -0.02
CLN6-216ENST00000636876 DGKQP52824 942 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 MANFP55145 182 aaKnown RBP14.9□□□□□ -0.02
CLN6-216ENST00000636876 WNT3P56703 355 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 SOX8P57073 446 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 PHC1P78364 1004 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 FUT7Q11130 342 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 MLC1Q15049 377 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 TBR1Q16650 682 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 COL28A1Q2UY09 1125 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 FAM174BQ3ZCQ3 159 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ZNF628Q5EBL2 1059 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 OR4F3Q6IEY1 312 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 BORAQ6PGQ7 559 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 FAM111BQ6SJ93 734 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 GPR155Q7Z3F1 870 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ZNF321PQ8N8H1 164 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ELP5Q8TE02 316 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ZNF721Q8TF20 911 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 KAT2AQ92830 837 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 CTHRC1Q96CG8 243 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 CCT8L2Q96SF2 557 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 CNPPD1Q9BV87 410 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 NUDT9Q9BW91 350 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 SEMA4CQ9C0C4 833 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 TMEM45AQ9NWC5 275 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 ZNF639Q9UID6 485 aa14.9□□□□□ -0.02
CLN6-216ENST00000636876 SLITRK5O94991 958 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ITGB2P05107 769 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ITGAMP11215 1152 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 S1PR1P21453 382 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 ITGA3P26006 1051 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 CCL11P51671 97 aa14.89□□□□□ -0.03
CLN6-216ENST00000636876 POLR2JP52435 117 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms