RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SYT14Q8NB59 555 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 NEURL3Q96EH8 262 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 ZNF607Q96SK3 696 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 FAM83CQ9BQN1 747 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 FUZQ9BT04 418 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM121BQ9BXQ6 578 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 CPEB1Q9BZB8 566 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 PIGUQ9H490 435 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 ELAC1Q9H777 363 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 YARS2Q9Y2Z4 477 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 LINC00862A6NCI5 91 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 ADAM12O43184 909 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 MTX2O75431 263 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 GBAP04062 536 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 CHRM5P08912 532 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 KCNJ5P48544 419 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 MAPK12P53778 367 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 FABP5Q01469 135 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 PLD1Q13393 1074 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 P2RY14Q15391 338 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 GLCCI1Q86VQ1 547 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 C9orf62Q8N4C0 152 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 SLC7A13Q8TCU3 470 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 PPP1R16AQ96I34 528 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 TM9SF2Q99805 663 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 ATF6BQ99941 703 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 ARHGAP9Q9BRR9 750 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 B3GAT2Q9NPZ5 323 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM39AQ9NV64 488 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 PTTG3PQ9NZH4 202 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 B4GALT6Q9UBX8 382 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 DYRK1BQ9Y463 629 aa14.04□□□□□ -0.16
CACNA1A-220ENST00000635988 A0A1W2PRQ8 180 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SEPT4O43236 478 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 HLA-DPB1P04440 258 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 OR1D2P34982 312 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 ATP12AP54707 1039 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 GAS1P54826 345 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 EFNB1P98172 346 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CDK5Q00535 292 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 IKZF1Q13422 519 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SLBPQ14493 270 aaKnown RBP eCLIP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 RPS26P11Q5JNZ5 115 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 OR2G6Q5TZ20 316 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 TYW3Q6IPR3 259 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SLC36A4Q6YBV0 504 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 Q6ZNB5 142 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 TAS1R1Q7RTX1 841 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 IQCF1Q8N6M8 205 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CELF5Q8N6W0 485 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 OR8H1Q8NGG4 311 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 WDR48Q8TAF3 677 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 GATAD2BQ8WXI9 593 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 ACOT12Q8WYK0 555 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 OTULINQ96BN8 352 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM19Q96HH6 336 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 GFM1Q96RP9 751 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 MALT1Q9UDY8 824 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SLC23A1Q9UHI7 598 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CD84Q9UIB8 345 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SMIM30A4D0T7 59 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 ISM1B1AKI9 464 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SEMA7AO75326 666 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SOD1P00441 154 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 TGFB1P01137 390 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 HK1P19367 917 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 GSTM3P21266 225 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 PRKACBP22694 351 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 POLR2LP62875 67 aaKnown RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CYP4F8P98187 520 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CNTN1Q12860 1018 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 LMAN2Q12907 356 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 SNAPC1Q16533 368 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 ZNF57Q68EA5 555 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 BPHLQ86WA6 291 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 FGF11Q92914 225 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 RNFT2Q96EX2 444 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 NECTIN4Q96NY8 510 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 TMEM175Q9BSA9 504 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 RANBP3Q9H6Z4 567 aaPredicted RBP14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 CXorf36Q9H7Y0 433 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 GALNT9Q9HCQ5 603 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 POLHQ9Y253 713 aa14.03□□□□□ -0.16
CACNA1A-220ENST00000635988 LOC102723532A0A0G2JNH3 316 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 PDPK1O15530 556 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 CHST10O43529 356 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 MMP20O60882 483 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 KLK1P06870 262 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 POLR2CP19387 275 aaPredicted RBP14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 EVI2BP34910 448 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 BDKRB1P46663 353 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 UBE3AQ05086 875 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 MADCAM1Q13477 382 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 DSG2Q14126 1118 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 MINDY4Q4G0A6 757 aa14.02□□□□□ -0.16
CACNA1A-220ENST00000635988 CCSMST1Q4G0I0 132 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms