RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PCSK4Q6UW60 755 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 C9orf40Q8IXQ3 194 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 OR4N2Q8NGD1 307 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 PNPT1Q8TCS8 783 aaKnown RBP7.94□□□□□ -1.14
CDKL5-209ENST00000635828 METTL21AQ8WXB1 218 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 RIT1Q92963 219 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 PPCDCQ96CD2 204 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 DPY30Q9C005 99 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 SEMA4CQ9C0C4 833 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 ROGDIQ9GZN7 287 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 EPN3Q9H201 632 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 CLMPQ9H6B4 373 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 CXorf36Q9H7Y0 433 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 EQTNQ9NQ60 294 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 SIRT3Q9NTG7 399 aaPredicted RBP7.94□□□□□ -1.14
CDKL5-209ENST00000635828 MAT2BQ9NZL9 334 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 TMED5Q9Y3A6 229 aa7.94□□□□□ -1.14
CDKL5-209ENST00000635828 NSG1A0A0A6YYJ2 146 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 OR10H2O60403 315 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CBX7O95931 251 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 TLX1P31314 330 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PRKAG1P54619 331 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CORO7P57737 925 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 IGLV3-21P80748 117 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SZRD1Q7Z422 152 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PRR22Q8IZ63 422 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 FBXO27Q8NI29 283 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 C16orf58Q96GQ5 468 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 RBM18Q96H35 190 aaKnown RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CXorf21Q9HAI6 301 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SAR1AQ9NR31 198 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SEMA3GQ9NS98 782 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 MS4A12Q9NXJ0 267 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PLA2G3Q9NZ20 509 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LUZP4Q9P127 313 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 MAN2B2Q9Y2E5 1009 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PADI2Q9Y2J8 665 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SNX8Q9Y5X2 465 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PCNX3Q9H6A9 2034 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LOC102723996A0A087X1L8 192 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 UPK1AO00322 258 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 NR5A2O00482 541 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PORP16435 677 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 STT3AP46977 705 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 NR0B1P51843 470 aaKnown RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LY6DQ14210 128 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LINC00303Q3SY05 128 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 AGKQ53H12 422 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LINC00696Q6ZRV3 163 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 PIGWQ7Z7B1 504 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 HMGN2P46Q86SG4 172 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ZSCAN1Q8NBB4 408 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 TANKQ92844 425 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 THOC3Q96J01 351 aaKnown RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 DGAT2Q96PD7 388 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 IL1RL2Q9HB29 575 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SERHLQ9NQF3 203 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ZNF71Q9NQZ8 489 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CLCA3PQ9Y6N3 262 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 NINQ8N4C6 2090 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 MED12Q93074 2177 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 MYO1GB0I1T2 1018 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SLC22A3O75751 556 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CPSF4O95639 269 aaKnown RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ALPPP05187 535 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 TROVE2P10155 538 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SOX11P35716 441 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ARFIP1P53367 373 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 SLC26A5P58743 744 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 VAC14Q08AM6 782 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ZNF628Q5EBL2 1059 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 CPTPQ5TA50 214 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LRRC69Q6ZNQ3 347 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ST13P4Q8IZP2 240 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 LRRC25Q8N386 305 aaPredicted RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 OR52R1Q8NGF1 315 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 ARSGQ96EG1 525 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 DUSP26Q9BV47 211 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 GMPR2Q9P2T1 348 aaKnown RBP7.93□□□□□ -1.14
CDKL5-209ENST00000635828 KCNE3Q9Y6H6 103 aa7.93□□□□□ -1.14
CDKL5-209ENST00000635828 WWP2O00308 870 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 FBP2O00757 339 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 SNUPNO95149 360 aaKnown RBP7.92□□□□□ -1.14
CDKL5-209ENST00000635828 PGRP06401 933 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 CPA2P48052 419 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 TCTN3Q6NUS6 607 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 ZNF700Q9H0M5 742 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 ADAP2Q9NPF8 381 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 ZNF780BQ9Y6R6 833 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 SPACA6W5XKT8 324 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 UTP20O75691 2785 aaKnown RBP7.92□□□□□ -1.14
CDKL5-209ENST00000635828 TRBV11-1A0A0K0K1C0 115 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 SAGE2PA6NJ88 616 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 WISP2O76076 250 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 IGKV3-11P04433 115 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 PRPS2P11908 318 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 ITGA3P26006 1051 aa7.92□□□□□ -1.14
CDKL5-209ENST00000635828 MANFP55145 182 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms