RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 NPRL3Q12980 569 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 AAK1Q2M2I8 961 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 CHRFAM7AQ494W8 412 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 IER5LQ5T953 404 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 MANEALQ5VSG8 457 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 PM20D1Q6GTS8 502 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 HACD2Q6Y1H2 254 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 CLECL1Q8IZS7 167 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 TTC9BQ8N6N2 239 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 PEX11GQ96HA9 241 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ATG5Q9H1Y0 275 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 SLC7A11Q9UPY5 501 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM14AQ9Y6G1 99 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 OXSR1O95747 527 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 CYBAP13498 195 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RBMXP38159 391 aaKnown RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF45Q02386 682 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 LRFN4Q6PJG9 635 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 FIGLAQ6QHK4 219 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 LRRTM3Q86VH5 581 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ELP5Q8TE02 316 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GATAD2BQ8WXI9 593 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 NKX2-4Q9H2Z4 354 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GJD2Q9UKL4 321 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 M0QZQ0 153 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 LATO43561 262 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GTF2F2P13984 249 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 IL1RNP18510 177 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 NDUFV2P19404 249 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GRPRP30550 384 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 LCN1P31025 176 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 CD97P48960 835 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 SHC2P98077 582 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 HHEXQ03014 270 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RCAN2Q14206 197 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 FAM76BQ5HYJ3 339 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ISCA2Q86U28 154 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GALNT11Q8NCW6 608 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 OR5L2Q8NGL0 311 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM184CQ9NVA4 438 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 INMT-MINDY4F8WBC2 141 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RAD51DO75771 328 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 CTSAP10619 480 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ETFAP13804 333 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GPR4P46093 362 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 IST1P53990 364 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 FAM69BQ5VUD6 431 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ENPP6Q6UWR7 440 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 FAM43BQ6ZT52 329 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 HS3ST5Q8IZT8 346 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 WDR20Q8TBZ3 569 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 C16orf78Q8WTQ4 265 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 L3HYPDHQ96EM0 354 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 NECTIN4Q96NY8 510 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RXFP3Q9NSD7 469 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF701Q9NV72 531 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RARRES3Q9UL19 164 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 DNMT3AQ9Y6K1 912 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 GXYLT2A0PJZ3 443 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 M0R036 132 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 NPC1O15118 1278 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 DCKP27707 260 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ACVR1BP36896 505 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ARF3P61204 181 aaPredicted RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ARF1P84077 181 aaKnown RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 POU4F2Q12837 409 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 MRPL10Q7Z7H8 261 aaKnown RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 UBQLNLQ8IYU4 475 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 PGAM5Q96HS1 289 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 TPSD1Q9BZJ3 242 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 MAGIXQ9H6Y5 334 aa12.22□□□□□ -0.45
SCN8A-209ENST00000627620 NUFIP1Q9UHK0 495 aaKnown RBP12.22□□□□□ -0.45
SCN8A-209ENST00000627620 RBBP9O75884 186 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 SEMA4FO95754 770 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 MT-ND2P03891 347 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 C7P10643 843 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 HNRNPKP61978 463 aaKnown RBP eCLIP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 NTHL1P78549 312 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 LRP8Q14114 963 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TMPPEQ6ZT21 453 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ZNF584Q8IVC4 421 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ZC3H10Q96K80 434 aaKnown RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 LRR1Q96L50 414 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ACTL7AQ9Y615 435 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 XRN1Q8IZH2 1706 aaKnown RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 CIB4A0PJX0 185 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 SLC22A31A6NKX4 558 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 AURKAO14965 403 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 EEF1E1O43324 174 aaKnown RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 RORAP35398 523 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ERVPABLB-1P60509 514 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 ARSJQ5FYB0 599 aaPredicted RBP12.21□□□□□ -0.45
SCN8A-209ENST00000627620 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.45
SCN8A-209ENST00000627620 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms