RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	TIA1	P31483	386 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	ALDH9A1	P49189	494 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	RPL6	Q02878	288 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	MLLT11	Q13015	90 aa	Predicted RBP	13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	SP140	Q13342	867 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	NCF4	Q15080	339 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC5A12	Q1EHB4	618 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF385B	Q569K4	471 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	SPIN4	Q56A73	249 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	KRT74	Q7RTS7	529 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	OR4N4	Q8N0Y3	316 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	GHDC	Q8N2G8	530 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	CPA6	Q8N4T0	437 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	CLDN22	Q8N7P3	220 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	ALG14	Q96F25	216 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	MARVELD1	Q9BSK0	173 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	OR51B5	Q9H339	312 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	REEP4	Q9H6H4	257 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	PPP1R3E	Q9H7J1	279 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	STOML2	Q9UJZ1	356 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	LSM7	Q9UK45	103 aa	Known RBP	13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	ANGPT4	Q9Y264	503 aa		13.66	□□□□□ -0.22
SYNRG-231	ENST00000622045	C2orf92	A0A1B0GVN3	265 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	TMEM88B	A6NKF7	163 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	ARHGEF33	A8MVX0	844 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	TEX46	H3BTG2	121 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	LMAN2	Q12907	356 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CCSMST1	Q4G0I0	132 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	BRAT1	Q6PJG6	821 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CEACAM20	Q6UY09	585 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	ZNF655	Q8N720	491 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	OR52N2	Q8NGI0	321 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	TMEM43	Q9BTV4	400 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	MCOLN1	Q9GZU1	580 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SPNS1	Q9H2V7	528 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	B4GALT6	Q9UBX8	382 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RPL36	Q9Y3U8	105 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	ENPP4	Q9Y6X5	453 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RNASET2	O00584	256 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CHP2	O43745	196 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC16A8	O95907	504 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RAF1	P04049	648 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	C1S	P09871	688 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CD70	P32970	193 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CD79B	P40259	229 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	BDKRB1	P46663	353 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	XK	P51811	444 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	EPHA5	P54756	1037 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	EXOSC2	Q13868	293 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SPOUT1	Q5T280	376 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	UNC5D	Q6UXZ4	953 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	LSR	Q86X29	649 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	KIF18B	Q86Y91	864 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	DUSP18	Q8NEJ0	188 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	PROKR2	Q8NFJ6	384 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	BEST4	Q8NFU0	473 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	AP3S1	Q92572	193 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CASD1	Q96PB1	797 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	MIEF1	Q9NQG6	463 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RDH8	Q9NYR8	311 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	HEPACAM2	A8MVW5	462 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC16A5	O15375	505 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	LANCL1	O43813	399 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	TRIM3	O75382	744 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	PRKAR2A	P13861	404 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	ELN	P15502	786 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CTGF	P29279	349 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SOX18	P35713	384 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CTSO	P43234	321 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	PLXNA3	P51805	1871 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RAE1	P78406	368 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	FABP5	Q01469	135 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	HEPACAM	Q14CZ8	416 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SEC23B	Q15437	767 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	STK11	Q15831	433 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	GARNL3	Q5VVW2	1013 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	MED27	Q6P2C8	311 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	IL20RB	Q6UXL0	311 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	RNF180	Q86T96	592 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	OXR1	Q8N573	874 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SIPA1	Q96FS4	1042 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	FOPNL	Q96NB1	174 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CHST8	Q9H2A9	424 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	SLC9A8	Q9Y2E8	581 aa		13.65	□□□□□ -0.22
SYNRG-231	ENST00000622045	CHD5	Q8TDI0	1954 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	SLC30A4	O14863	429 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	UGDH	O60701	494 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	TPPP	O94811	219 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	FCER2	P06734	321 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	CXCL3	P19876	107 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	XCR1	P46094	333 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	SPINT3	P49223	89 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	TEK	Q02763	1124 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	ARSK	Q6UWY0	536 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	GPR155	Q7Z3F1	870 aa		13.65	□□□□□ -0.23
SYNRG-231	ENST00000622045	SZRD1	Q7Z422	152 aa		13.65	□□□□□ -0.23

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