RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
FAM3A-222ENST00000621967 PPP5CP53041 499 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 NUDT6P53370 316 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 CDK3Q00526 305 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 ZNF404Q494X3 552 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 CYP27C1Q4G0S4 372 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 PMS2CLQ68D20 193 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 FAM83HQ6ZRV2 1179 aaPredicted RBP16.53■□□□□ 0.24
FAM3A-222ENST00000621967 USP43Q70EL4 1123 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 SNX29P2Q8IUI4 249 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 MMP21Q8N119 569 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 KRT78Q8N1N4 520 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 ZBTB44Q8NCP5 570 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 NXF2Q9GZY0 626 aaKnown RBP16.53■□□□□ 0.24
FAM3A-222ENST00000621967 RHBGQ9H310 441 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 MIEF1Q9NQG6 463 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 FTSJ1Q9UET6 329 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 PNMA8BQ9ULN7 279 aaPredicted RBP16.53■□□□□ 0.24
FAM3A-222ENST00000621967 HS3ST3A1Q9Y663 406 aa16.53■□□□□ 0.24
FAM3A-222ENST00000621967 THADAQ6YHU6 1953 aa16.52■□□□□ 0.24
FAM3A-222ENST00000621967 POM121BA6NF01 834 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 ZAR1LA6NP61 321 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 H0Y8X5 98 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 CACNB4O00305 520 aaPredicted RBP16.52■□□□□ 0.23
FAM3A-222ENST00000621967 STSP08842 583 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 FUT4P22083 530 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 MAOBP27338 520 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 LYSMD4Q5XG99 296 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 SAXO2Q658L1 398 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 ZNF770Q6IQ21 691 aaPredicted RBP16.52■□□□□ 0.23
FAM3A-222ENST00000621967 REEP3Q6NUK4 255 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 PLEKHG7Q6ZR37 379 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 PDZD3Q86UT5 571 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 PSMA8Q8TAA3 256 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 UTP15Q8TED0 518 aaKnown RBP16.52■□□□□ 0.23
FAM3A-222ENST00000621967 RAD51AP1Q96B01 352 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 NEURL3Q96EH8 262 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 CRELD1Q96HD1 420 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 SLC6A18Q96N87 628 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 IL17FQ96PD4 163 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 SORBS1Q9BX66 1292 aaKnown RBP16.52■□□□□ 0.23
FAM3A-222ENST00000621967 TEX101Q9BY14 249 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 NLNQ9BYT8 704 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 IMPAD1Q9NX62 359 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 RAB23Q9ULC3 237 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 FAM32AQ9Y421 112 aaKnown RBP16.52■□□□□ 0.23
FAM3A-222ENST00000621967 PCDHGA3Q9Y5H0 932 aa16.52■□□□□ 0.23
FAM3A-222ENST00000621967 DSPPQ9NZW4 1301 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PLPP1O14494 284 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PTHP01270 115 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 IFNW1P05000 195 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 RPLP0P05388 317 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 DDCP20711 480 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 KELP23276 732 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 GRK5P34947 590 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 TRIM23P36406 574 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 ST3GAL4Q11206 333 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CBX3Q13185 183 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PTGES3Q15185 160 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PLK5Q496M5 336 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 TUBA3EQ6PEY2 450 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 LACC1Q8IV20 430 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 C9orf43Q8TAL5 461 aaPredicted RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 ORAI3Q9BRQ5 295 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 LRFN3Q9BTN0 628 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 APOOQ9BUR5 198 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 A4GALTQ9NPC4 353 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 AHSPQ9NZD4 102 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CCDC59Q9P031 241 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 SPATA7Q9P0W8 599 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 WBP11Q9Y2W2 641 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PCYT1BQ9Y5K3 369 aaPredicted RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CFAP20Q9Y6A4 193 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 GON4LQ3T8J9 2241 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 SH3D21A4FU49 640 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 RABIFP47224 123 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CDC42P60953 191 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 RPA4Q13156 261 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PUM1Q14671 1186 aaKnown RBP eCLIP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 DUSP7Q16829 419 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 TOR1AIP1Q5JTV8 583 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 AGAP7PQ5VUJ5 663 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 KLHL17Q6TDP4 642 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 DCUN1D3Q8IWE4 304 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 ADGRF3Q8IZF5 1079 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 STX19Q8N4C7 294 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 NATD1Q8N6N6 113 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 OR5AR1Q8NGP9 310 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 OR5P2Q8WZ92 322 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 BMFQ96LC9 184 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CDCA4Q9BXL8 241 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 NMNAT1Q9HAN9 279 aaPredicted RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 PELI2Q9HAT8 420 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 SLAMF7Q9NQ25 335 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 CNOT2Q9NZN8 540 aaKnown RBP16.51■□□□□ 0.23
FAM3A-222ENST00000621967 ASF1AQ9Y294 204 aa16.51■□□□□ 0.23
FAM3A-222ENST00000621967 TAF4O00268 1085 aa16.5■□□□□ 0.23
FAM3A-222ENST00000621967 MPZL2O60487 215 aa16.5■□□□□ 0.23
FAM3A-222ENST00000621967 RACK1P63244 317 aaKnown RBP16.5■□□□□ 0.23
FAM3A-222ENST00000621967 OLR1P78380 273 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms