RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 HSF2Q03933 536 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CRYZQ08257 329 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 FGL2Q14314 439 aa8.79□□□□□ -1
GGA3-223ENST00000621870 SMU1Q2TAY7 513 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ATG9BQ674R7 924 aa8.79□□□□□ -1
GGA3-223ENST00000621870 CCSAPQ6IQ19 270 aaPredicted RBP8.79□□□□□ -1
GGA3-223ENST00000621870 LRRC69Q6ZNQ3 347 aa8.79□□□□□ -1
GGA3-223ENST00000621870 P2RY8Q86VZ1 359 aa8.79□□□□□ -1
GGA3-223ENST00000621870 OR1E3Q8WZA6 343 aa8.79□□□□□ -1
GGA3-223ENST00000621870 L3HYPDHQ96EM0 354 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TMEM19Q96HH6 336 aa8.79□□□□□ -1
GGA3-223ENST00000621870 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
GGA3-223ENST00000621870 TM9SF2Q99805 663 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ZNF304Q9HCX3 659 aa8.79□□□□□ -1
GGA3-223ENST00000621870 ING3Q9NXR8 418 aa8.79□□□□□ -1
GGA3-223ENST00000621870 DNAJC27Q9NZQ0 273 aa8.79□□□□□ -1
GGA3-223ENST00000621870 DHCR7Q9UBM7 475 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 UPB1Q9UBR1 384 aa8.79□□□□□ -1
GGA3-223ENST00000621870 YBX2Q9Y2T7 364 aaKnown RBP8.79□□□□□ -1
GGA3-223ENST00000621870 A0A1W2PRG6 482 aa8.78□□□□□ -1
GGA3-223ENST00000621870 TMEM202A6NGA9 273 aa8.78□□□□□ -1
GGA3-223ENST00000621870 APOL3O95236 402 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PGCP20142 388 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CD27P26842 260 aa8.78□□□□□ -1
GGA3-223ENST00000621870 MAP3K8P41279 467 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OR2B6P58173 313 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RAB14P61106 215 aa8.78□□□□□ -1
GGA3-223ENST00000621870 HYAL1Q12794 435 aa8.78□□□□□ -1
GGA3-223ENST00000621870 LRIT3Q3SXY7 679 aa8.78□□□□□ -1
GGA3-223ENST00000621870 DENND5AQ6IQ26 1287 aa8.78□□□□□ -1
GGA3-223ENST00000621870 LIN54Q6MZP7 749 aa8.78□□□□□ -1
GGA3-223ENST00000621870 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
GGA3-223ENST00000621870 UTS2BQ765I0 119 aa8.78□□□□□ -1
GGA3-223ENST00000621870 LINC00471Q8N535 108 aa8.78□□□□□ -1
GGA3-223ENST00000621870 FRMD1Q8N878 549 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OR56A3Q8NH54 315 aa8.78□□□□□ -1
GGA3-223ENST00000621870 FAR1Q8WVX9 515 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ECHDC3Q96DC8 303 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CNDP2Q96KP4 475 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 DOHHQ9BU89 302 aa8.78□□□□□ -1
GGA3-223ENST00000621870 B3GAT2Q9NPZ5 323 aa8.78□□□□□ -1
GGA3-223ENST00000621870 DMRT3Q9NQL9 472 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SARDHQ9UL12 918 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
GGA3-223ENST00000621870 TMEM5Q9Y2B1 443 aa8.78□□□□□ -1
GGA3-223ENST00000621870 H0YGG7 62 aa8.78□□□□□ -1
GGA3-223ENST00000621870 J3QLW9 94 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SCAMP2O15127 329 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 TBX1O43435 398 aa8.78□□□□□ -1
GGA3-223ENST00000621870 GPR37L1O60883 481 aa8.78□□□□□ -1
GGA3-223ENST00000621870 BCAS2O75934 225 aaPredicted RBP8.78□□□□□ -1
GGA3-223ENST00000621870 ZNF19P17023 458 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SLC6A6P31641 620 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SFTPDP35247 375 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ADRA1AP35348 466 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ATP4BP51164 291 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RPS6KA3P51812 740 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ADPRHP54922 357 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ARF3P61204 181 aaPredicted RBP8.78□□□□□ -1
GGA3-223ENST00000621870 TAP2Q03519 686 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PLP2Q04941 152 aa8.78□□□□□ -1
GGA3-223ENST00000621870 GINS1Q14691 196 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SGCAQ16586 387 aa8.78□□□□□ -1
GGA3-223ENST00000621870 UGT3A2Q3SY77 523 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CDKL4Q5MAI5 379 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RNF220Q5VTB9 566 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OGFOD2Q6N063 350 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ZNF765Q7L2R6 523 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CHCHD4Q8N4Q1 142 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CLEC1AQ8NC01 280 aa8.78□□□□□ -1
GGA3-223ENST00000621870 OR9A2Q8NGT5 310 aa8.78□□□□□ -1
GGA3-223ENST00000621870 GAL3ST3Q96A11 431 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PNPLA2Q96AD5 504 aa8.78□□□□□ -1
GGA3-223ENST00000621870 MSANTD3Q96H12 275 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ERMAPQ96PL5 475 aaPredicted RBP8.78□□□□□ -1
GGA3-223ENST00000621870 ATOH8Q96SQ7 321 aa8.78□□□□□ -1
GGA3-223ENST00000621870 MAP3K3Q99759 626 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 NANSQ9NR45 359 aa8.78□□□□□ -1
GGA3-223ENST00000621870 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ACAD8Q9UKU7 415 aa8.78□□□□□ -1
GGA3-223ENST00000621870 MAN2B2Q9Y2E5 1009 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RPH3AQ9Y2J0 694 aaPredicted RBP8.78□□□□□ -1
GGA3-223ENST00000621870 PLEKHM1Q9Y4G2 1056 aa8.78□□□□□ -1
GGA3-223ENST00000621870 AP1M2Q9Y6Q5 423 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PAPPA2Q9BXP8 1791 aa8.78□□□□□ -1
GGA3-223ENST00000621870 C2orf92A0A1B0GVN3 265 aa8.78□□□□□ -1
GGA3-223ENST00000621870 CDC14CA4D256 554 aa8.78□□□□□ -1
GGA3-223ENST00000621870 VSTM2BA6NLU5 285 aa8.78□□□□□ -1
GGA3-223ENST00000621870 WASHC1A8K0Z3 465 aa8.78□□□□□ -1
GGA3-223ENST00000621870 LOC110117498-PIK3R3F6TDL0 507 aa8.78□□□□□ -1
GGA3-223ENST00000621870 RPLP0P05388 317 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 ZDHHC11BP0C7U3 371 aa8.78□□□□□ -1
GGA3-223ENST00000621870 PRKAR1AP10644 381 aa8.78□□□□□ -1
GGA3-223ENST00000621870 ZNF20P17024 532 aa8.78□□□□□ -1
GGA3-223ENST00000621870 GABRB3P28472 473 aa8.78□□□□□ -1
GGA3-223ENST00000621870 TSPAN5P62079 268 aa8.78□□□□□ -1
GGA3-223ENST00000621870 DCTN2Q13561 401 aaKnown RBP8.78□□□□□ -1
GGA3-223ENST00000621870 GPR18Q14330 331 aa8.78□□□□□ -1
GGA3-223ENST00000621870 TAZQ16635 292 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms