RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ADAP2Q9NPF8 381 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 DLL4Q9NR61 685 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 PRTFDC1Q9NRG1 225 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 IARS2Q9NSE4 1012 aaKnown RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 B4GALT7Q9UBV7 327 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 EMCNQ9ULC0 261 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 PPIEQ9UNP9 301 aaKnown RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 MRPS33Q9Y291 106 aaKnown RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 RPH3AQ9Y2J0 694 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 VPS13CQ709C8 3753 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 JMJD1CQ15652 2540 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 A0A088AWK7 358 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 A0A0G2JN53 185 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 A6NNC1 897 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 AQP7O14520 342 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SMNDC1O75940 238 aaKnown RBP eCLIP7.24□□□□□ -1.25
CLK1-215ENST00000621181 GLSO94925 669 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 IGHG3P01860 377 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 P04436 131 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 GABRA1P14867 456 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ZNF10P21506 573 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 CNR1P21554 472 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 BMP5P22003 454 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SERPINB9P50453 376 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 GPR143P51810 404 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 CDKN2DP55273 166 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 REEP5Q00765 189 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 KEAP1Q14145 624 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SLC10A1Q14973 349 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ZNF750Q32MQ0 723 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 RTL6Q6ICC9 239 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 RTL4Q6ZR62 310 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 Q71RC1 249 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 TRILQ7L0X0 811 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 CAMKMTQ7Z624 323 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 CDC20BQ86Y33 519 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SCUBE1Q8IWY4 988 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 TRIM42Q8IWZ5 723 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 KIRREL3Q8IZU9 778 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 TMEM251Q8N6I4 163 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 FAM47BQ8NA70 645 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 GOLM1Q8NBJ4 401 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 OR6Y1Q8NGX8 325 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 NRG4Q8WWG1 115 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 DAZLQ92904 295 aaKnown RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 LRRC46Q96FV0 321 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SCYL1Q96KG9 808 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 CNPPD1Q9BV87 410 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 DCLRE1BQ9H816 532 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 IL1RL2Q9HB29 575 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SACM1LQ9NTJ5 587 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 DYRK1BQ9Y463 629 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 KCNE2Q9Y6J6 123 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 IKBKGQ9Y6K9 419 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 TRGV5A0A0B4J1U4 118 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 A0A1B0GVC2 190 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 C4orf51C9J302 202 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ERI3O43414 337 aaKnown RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 CELA3AP09093 270 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 SMIM10L1P0DMW3 83 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ADSLP30566 484 aaPredicted RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 MAGEA12P43365 314 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 PTDSS1P48651 473 aaKnown RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 DNASE1L1P49184 302 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 TIAL1Q01085 375 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLK1-215ENST00000621181 LTBQ06643 244 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ELAVL1Q15717 326 aaKnown RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 FLYWCH1Q4VC44 716 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 RBM20Q5T481 1227 aaKnown RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 C1orf185Q5T7R7 199 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 TEDDM1Q5T9Z0 273 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 LGSNQ5TDP6 509 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 BRICD5Q6PL45 260 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 BIVMQ86UB2 503 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 CTAGE3PQ8IX95 158 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 TMEM132CQ8N3T6 1108 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 C2CD4AQ8NCU7 369 aaPredicted RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 FBXO27Q8NI29 283 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ACMSDQ8TDX5 336 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 WDR60Q8WVS4 1066 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 GAL3ST3Q96A11 431 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ISL2Q96A47 359 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 FBXL8Q96CD0 374 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 SMIM10Q96HG1 83 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 SGCZQ96LD1 299 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 CCDC106Q9BWC9 280 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 OR8D2Q9GZM6 311 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 PELI2Q9HAT8 420 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 DMRT3Q9NQL9 472 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 CORO1CQ9ULV4 474 aaPredicted RBP7.23□□□□□ -1.25
CLK1-215ENST00000621181 SLC22A14Q9Y267 594 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 ARHGAP21Q5T5U3 1957 aa7.23□□□□□ -1.25
CLK1-215ENST00000621181 SYNDIG1LA6NDD5 238 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 HSPB2A8KAH6 182 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 TGFBR3LH3BV60 316 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 DVL2O14641 736 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 B3GALT2O43825 422 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 RAF1P04049 648 aa7.22□□□□□ -1.25
CLK1-215ENST00000621181 ALDOAP04075 364 aaKnown RBP7.22□□□□□ -1.25
CLK1-215ENST00000621181 ENO2P09104 434 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms