RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SLC35G4P0C7Q5 338 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CTSAP10619 480 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 AVPR1BP47901 424 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 PREPP48147 710 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 AKR1D1P51857 326 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SMIM11AP58511 58 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 AP1S1P61966 158 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CDK6Q00534 326 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 RHAGQ02094 409 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CCDC157Q569K6 752 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 NPAS3Q8IXF0 933 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 OR10G6Q8NH81 332 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TEFMQ96QE5 360 aaKnown RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 FAIM2Q9BWQ8 316 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TSSK6Q9BXA6 273 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 MCOLN1Q9GZU1 580 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 NARFLQ9H6Q4 476 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 POLR1DQ9Y2S0 133 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 C2orf92A0A1B0GVN3 265 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 NPIPB15A6NHN6 443 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM229AB2RXF0 380 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 H3BNC9 293 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 I3L521 148 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 ADAM12O43184 909 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 HPGDSO60760 199 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 NME6O75414 186 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CH25HO95992 272 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SAGP10523 405 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 IL1RNP18510 177 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CSKP41240 450 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CRYBB2P43320 205 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 MAPK12P53778 367 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 CTBP2P56545 445 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 POU6F2P78424 691 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 RING1Q06587 406 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF267Q14586 743 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TEAD2Q15562 447 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 LAPTM4BQ86VI4 370 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 NXPE1Q8N323 547 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 OR52P1PQ8NH57 321 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 KLHL6Q8WZ60 621 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 ZFP3Q96NJ6 502 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 YIPF4Q9BSR8 244 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TMED9Q9BVK6 235 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 TTLL2Q9BWV7 592 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SORBS1Q9BX66 1292 aaKnown RBP6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SLA2Q9H6Q3 261 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 PLCXD1Q9NUJ7 323 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 IL20RAQ9UHF4 553 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 SLC23A1Q9UHI7 598 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 A3GALT2U3KPV4 340 aa6.62□□□□□ -1.35
NEDD9-216ENST00000620854 PTPRDP23468 1912 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM202A6NGA9 273 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TOXO94900 526 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 OR6A2O95222 327 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 STATHP02808 62 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 EPHX1P07099 455 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 CA3P07451 260 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SYPP08247 313 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 CSTF2P33240 577 aaKnown RBP eCLIP6.61□□□□□ -1.351e-7■■■□□ 19
NEDD9-216ENST00000620854 EVI2BP34910 448 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 STK19P49842 368 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RPS13P62277 151 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 GPR19Q15760 415 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.61□□□□□ -1.354e-7■■□□□ 12
NEDD9-216ENST00000620854 CLEC12AQ5QGZ9 265 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TAS1R1Q7RTX1 841 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 CMTM8Q8IZV2 173 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 DNAJC5GQ8N7S2 189 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 AP3S1Q92572 193 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TBX5Q99593 518 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 POLR2J3Q9H1A7 115 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MIXL1Q9H2W2 232 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ACOXLQ9NUZ1 547 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 EVA1BQ9NVM1 165 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TXNL4BQ9NX01 149 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ING4Q9UNL4 249 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MYOFQ9NZM1 2061 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SPEGQ15772 3267 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF840PA6NDX5 716 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 HCN1O60741 890 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RLN1P04808 185 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 IFNA16P05015 189 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 GABRB1P18505 474 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RPL3P39023 403 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RGS8P57771 180 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MLLT1Q03111 559 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 DSC1Q08554 894 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PIN1Q13526 163 aaPredicted RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 VEZF1Q14119 521 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SUZ12Q15022 739 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 LYPLAL1Q5VWZ2 237 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 POMZP3Q6PJE2 187 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 BRAT1Q6PJG6 821 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ANKRD33Q7Z3H0 272 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms