RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 VPS4AQ9UN37 437 aa7.52□□□□□ -1.21
CPNE3-209ENST00000620393 AP3M1Q9Y2T2 418 aa7.52□□□□□ -1.21
CPNE3-209ENST00000620393 PCDHGA7Q9Y5G6 932 aa7.52□□□□□ -1.21
CPNE3-209ENST00000620393 GMEB1Q9Y692 573 aa7.52□□□□□ -1.21
CPNE3-209ENST00000620393 C15orf38-AP3S2A0A0A6YYH1 394 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TEX51A0A1B0GUA7 166 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MYOCOSA0A1B0GUC4 107 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SYNDIG1LA6NDD5 238 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CDRT15L2A8MXV6 281 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 EVPLLA8MZ36 301 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CLIC1O00299 241 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 EMC8O43402 210 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 OR10H2O60403 315 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 DNAJC8O75937 253 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 DXOO77932 396 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SLITRK5O94991 958 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 HEXBP07686 556 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CYC1P08574 325 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 IFI6P09912 130 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 RAB40ALP0C0E4 278 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TNNI3P19429 210 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TCN2P20062 427 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MAOAP21397 527 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NT5EP21589 574 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CD82P27701 267 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SLC5A2P31639 672 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 GPC1P35052 558 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 PGM1P36871 562 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 STT3AP46977 705 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CCT3P49368 545 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CDK9P50750 372 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 GABREP78334 506 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MGAT2Q10469 447 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MAP4K2Q12851 820 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 HSPB3Q12988 150 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CAPRIN1Q14444 709 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 RTP5Q14D33 572 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NCF4Q15080 339 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NSDHLQ15738 373 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 GTDC1Q4AE62 458 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MFSD4BQ5TF39 518 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TMEM64Q6YI46 380 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 ARPINQ7Z6K5 226 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 PRSS58Q8IYP2 241 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 ARHGAP24Q8N264 748 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 ADCY4Q8NFM4 1077 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 OR8J3Q8NGG0 315 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 OR9A2Q8NGT5 310 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF675Q8TD23 568 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 ZFP90Q8TF47 636 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 RIT1Q92963 219 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TMEM125Q96AQ2 219 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CTHRC1Q96CG8 243 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 DGAT2Q96PD7 388 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 PELOQ9BRX2 385 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SLC39A3Q9BRY0 314 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 THTPAQ9BU02 230 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CADM1Q9BY67 442 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 FAM117AQ9C073 453 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 MMADHCQ9H3L0 296 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 EPS8L2Q9H6S3 715 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CXorf21Q9HAI6 301 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TPT1P8Q9HAU6 139 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 C3orf14Q9HBI5 128 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NEUROD4Q9HD90 331 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SEMA3GQ9NS98 782 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SIRT3Q9NTG7 399 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 CMTM6Q9NX76 183 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NTMQ9P121 344 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 TMEM181Q9P2C4 612 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 NXT1Q9UKK6 140 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 PRPF19Q9UMS4 504 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 FARSAQ9Y285 508 aaKnown RBP7.51□□□□□ -1.21
CPNE3-209ENST00000620393 SNX8Q9Y5X2 465 aa7.51□□□□□ -1.21
CPNE3-209ENST00000620393 A0A087WV62 115 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 TCRBV16S1A1N1A0A5B0 115 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 IDSB3KWA1 339 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PLOD3O60568 738 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 RAD1O60671 282 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ALOX12BO75342 701 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 KLF7O75840 302 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 KRT75O95678 551 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 IFNA16P05015 189 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 GPX2P18283 190 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 S1PR1P21453 382 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PPIBP23284 216 aaKnown RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SOX18P35713 384 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 EFNA3P52797 238 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PUM1Q14671 1186 aaKnown RBP eCLIP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 LTB4RQ15722 352 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PRICKLE4Q2TBC4 344 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SPDYE7PQ495Y7 208 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SPATS1Q496A3 300 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 TRMT12Q53H54 448 aaKnown RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF628Q5EBL2 1059 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PGM2L1Q6PCE3 622 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 BHLHB9Q6PI77 547 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 FAM111BQ6SJ93 734 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms