RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OR4N5Q8IXE1 308 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 RBM12BQ8IXT5 1001 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 TTC29Q8NA56 475 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 OR56A1Q8NGH5 318 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 GIPC3Q8TF64 312 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 APOBEC4Q8WW27 367 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ELP4Q96EB1 424 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 PIP5K1AQ99755 562 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 EQTNQ9NQ60 294 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 STARD5Q9NSY2 213 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 POMT2Q9UKY4 750 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 DAPP1Q9UN19 280 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 H3BSA7 217 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 TLR4O00206 839 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 EMC8O43402 210 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 UGT2B11O75310 529 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 NME6O75414 186 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 PDE9AO76083 593 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 IFNW1P05000 195 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 AGXTP21549 392 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 EEF1B2P24534 225 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 VSX2P58304 361 aaPredicted RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FUT5Q11128 374 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ELOCQ15369 112 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 DEFB110Q30KQ9 67 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 C6orf141Q5SZD1 244 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 BHLHB9Q6PI77 547 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 HSPA12BQ96MM6 686 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 ZNF607Q96SK3 696 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FAM60AQ9NP50 221 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 RHCGQ9UBD6 479 aa16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 FAM32AQ9Y421 112 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-205ENST00000617641 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 STK25O00506 426 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 CDH2P19022 906 aaPredicted RBP16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 GSTT1P30711 240 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 PRR5P85299 388 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 IL18R1Q13478 541 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 RBM48Q5RL73 367 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 SLC5A8Q8N695 610 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 CSNK1A1LQ8N752 337 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 NUP43Q8NFH3 380 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 CADM4Q8NFZ8 388 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 OR10G2Q8NGC3 310 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 SGCDQ92629 289 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 HDAC2Q92769 488 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 PROX1Q92786 737 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 COL26A1Q96A83 441 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 NMD3Q96D46 503 aaKnown RBP16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 FEVQ99581 238 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 ACER3Q9NUN7 267 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 RLIMQ9NVW2 624 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 SEC14L3Q9UDX4 400 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 KCNE3Q9Y6H6 103 aa16.32■□□□□ 0.2
PCDHGC3-205ENST00000617641 ZSCAN9O15535 394 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CTSBP07858 339 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CHRM4P08173 479 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ZNF10P21506 573 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CRHBPP24387 322 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 PPP2R1BP30154 601 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 PEX19P40855 299 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 XKP51811 444 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 RACK1P63244 317 aaKnown RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 IL5RAQ01344 420 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 KCNC4Q03721 635 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 GPR153Q6NV75 609 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 HMGN2P46Q86SG4 172 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ZNF605Q86T29 641 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 LGI4Q8N135 537 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 LRRC25Q8N386 305 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ARL14Q8N4G2 192 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CNIH3Q8TBE1 160 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ADAMTS16Q8TE57 1224 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 MOAP1Q96BY2 351 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 SEMA6CQ9H3T2 930 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 TBC1D17Q9HA65 648 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 C3orf14Q9HBI5 128 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 DOLKQ9UPQ8 538 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CEPT1Q9Y6K0 416 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 SCN2AQ99250 2005 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 RHCEP18577 417 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 RYKP34925 604 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 KCNJ5P48544 419 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ID2Q02363 134 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 SPEM1Q8N4L4 309 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ZNF655Q8N720 491 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 OR4K14Q8NGD5 310 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 OR5T3Q8NGG3 340 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 NELL2Q99435 816 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 CCDC3Q9BQI4 270 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 WFDC6Q9BQY6 131 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 NPLQ9BXD5 320 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 IL21RQ9HBE5 538 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 GPC6Q9Y625 555 aaPredicted RBP16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 ABCA7Q8IZY2 2146 aa16.31■□□□□ 0.2
PCDHGC3-205ENST00000617641 PCDH17O14917 1159 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms