RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 ADGRD2Q7Z7M1 963 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 HORMAD2Q8N7B1 307 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 OR4C6Q8NH72 309 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 PHOSPHO2Q8TCD6 241 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 SLC30A2Q9BRI3 323 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 PITHD1Q9GZP4 211 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CDH7Q9ULB5 785 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 GPC6Q9Y625 555 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 BRWD1Q9NSI6 2320 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 GTPBP1O00178 669 aaKnown RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CLEC3AO75596 197 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CPNE6O95741 557 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 CDK1P06493 297 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 KIAA0040Q15053 153 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 RNF165Q6ZSG1 346 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 WDR92Q96MX6 357 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 PCDHGA10Q9Y5H3 936 aa13.33□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF860A6NHJ4 632 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 KCNJ13O60928 360 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 LILRB3O75022 631 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 IRF4Q15306 451 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 DEFB134Q4QY38 66 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 LILRA6Q6PI73 481 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TMEM179BQ7Z7N9 219 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 OR5D16Q8NGK9 328 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TRPV5Q9NQA5 729 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 COMMD3Q9UBI1 195 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 KIAA0355O15063 1070 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 MGAMO43451 1857 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 AKAP8O43823 692 aaKnown RBP13.32□□□□□ -0.28
SSBP2-220ENST00000615665 PLOD3O60568 738 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 CTSLP07711 333 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 FAM71E1Q6IPT2 247 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 OSTF1Q92882 214 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 HRASLS5Q96KN8 279 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 LRR1Q96L50 414 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 KCNN2Q9H2S1 579 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TNFRSF10DQ9UBN6 386 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 APOL3O95236 402 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 HIST1H2ABP04908 130 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 NTSR1P30989 418 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 CA5AP35218 305 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 TBCEQ15813 527 aaPredicted RBP13.32□□□□□ -0.28
SSBP2-220ENST00000615665 PYCR3Q53H96 274 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 HSDL2Q6YN16 418 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 HIST3H2AQ7L7L0 130 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 B3GNT7Q8NFL0 401 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 HIST1H2ACQ93077 130 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 SLITRK2Q9H156 845 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 NDUFAF4Q9P032 175 aa13.32□□□□□ -0.28
SSBP2-220ENST00000615665 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
SSBP2-220ENST00000615665 DAPL1A0PJW8 107 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 GPR89AB7ZAQ6 455 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 ETHE1O95571 254 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 GPR89BP0CG08 455 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 MLLT10P55197 1068 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 FRMPD2BQ6IN97 320 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF354BQ96LW1 612 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 TBX5Q99593 518 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 MACROD1Q9BQ69 325 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-220ENST00000615665 RACGAP1Q9H0H5 632 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 RBM38Q9H0Z9 239 aaKnown RBP13.31□□□□□ -0.28
SSBP2-220ENST00000615665 PRSS16Q9NQE7 514 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 A0A0G2JPF8 293 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 HNRNPCL3B7ZW38 293 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 HNRNPCL4P0DMR1 293 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 PPP5CP53041 499 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF852Q6ZMS4 543 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 RTL4Q6ZR62 310 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 USP51Q70EK9 711 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 PJA1Q8NG27 643 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 COQ8BQ96D53 544 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 IFT52Q9Y366 437 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 PRRT4C9JH25 899 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 BTN3A3O00478 584 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 TNFP01375 233 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 PTNP21246 168 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 GJA4P35212 333 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 RPS15AP62244 130 aaKnown RBP13.31□□□□□ -0.28
SSBP2-220ENST00000615665 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-220ENST00000615665 IQCF1Q8N6M8 205 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 GGHQ92820 318 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 ZBTB20Q9HC78 741 aaPredicted RBP13.31□□□□□ -0.28
SSBP2-220ENST00000615665 CLDND1Q9NY35 253 aa13.31□□□□□ -0.28
SSBP2-220ENST00000615665 TAS2R7Q9NYW3 318 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms