RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ST13P4Q8IZP2 240 aaPredicted RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 GCNT2Q8N0V5 402 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 TCAIMQ8N3R3 496 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF441Q8N8Z8 693 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SPPL2AQ8TCT8 520 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SLC44A1Q8WWI5 657 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 INTS12Q96CB8 462 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 VPS39Q96JC1 886 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SECISBP2Q96T21 854 aaKnown RBP15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 TUBA1CQ9BQE3 449 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 TMEM79Q9BSE2 394 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 ANGPTL4Q9BY76 406 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 SNX15Q9NRS6 342 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 MS4A12Q9NXJ0 267 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF226Q9NYT6 803 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 PACSIN3Q9UKS6 424 aa15.69■□□□□ 0.1
CSNK1E-215ENST00000612795 C2orf92A0A1B0GVN3 265 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 GNB5O14775 395 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 CTIFO43310 598 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 PRAMEF4O60810 478 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 CRLF1O75462 422 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 SCELO95171 688 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TLX1P31314 330 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 SOX18P35713 384 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 NAGLUP54802 743 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TNFRSF17Q02223 184 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TGFBIQ15582 683 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 PDK4Q16654 411 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TMEM35AQ53FP2 167 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 FBXO48Q5FWF7 155 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 FNDC7Q5VTL7 733 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 PRAMEF9Q5VWM5 478 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 C20orf204Q6ZNR8 217 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 YRDCQ86U90 279 aaKnown RBP15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 FAM83FQ8NEG4 500 aaPredicted RBP15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TANKQ92844 425 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 RIT1Q92963 219 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 CFAP36Q96G28 342 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 TMEM41AQ96HV5 264 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 KLHL28Q9NXS3 571 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 PHF11Q9UIL8 331 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 NPFFR2Q9Y5X5 522 aa15.68■□□□□ 0.1
CSNK1E-215ENST00000612795 SONP18583 2426 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 FAM95CA0A1B0GW59 222 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 DEFB108AA8MXU0 73 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SAP18O00422 153 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SIAH2O43255 324 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 PRKRAO75569 313 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 RCBTB2O95199 551 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 PCNAP12004 261 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 CD22P20273 847 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 HSPA7P48741 367 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 NRG3P56975 720 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 IRF8Q02556 426 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SRYQ05066 204 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SLAMF1Q13291 335 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SETDB1Q15047 1291 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 KBTBD12Q3ZCT8 623 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 RNASEH2BQ5TBB1 312 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SCIMPQ6UWF3 145 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 OR1J4Q8NGS1 313 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 MED18Q9BUE0 208 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 SORBS1Q9BX66 1292 aaKnown RBP15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 LZTFL1Q9NQ48 299 aa15.67■□□□□ 0.1
CSNK1E-215ENST00000612795 MXRA5Q9NR99 2828 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 A8MXE2 369 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 SNPHO15079 494 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 TAPBPO15533 448 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 SMNDC1O75940 238 aaKnown RBP eCLIP15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 TGFB1P01137 390 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 KRT15P19012 456 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 PTPN6P29350 595 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 BUD31P41223 144 aaPredicted RBP15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 CASP3P42574 277 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 PTH2RP49190 550 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 RAP1GDS1P52306 607 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 EEF1A1P68104 462 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 CHIT1Q13231 466 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 GAB1Q13480 694 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 MSS51Q4VC12 460 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 EEF1A1P5Q5VTE0 462 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 C18orf63Q68DL7 685 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 TIGD3Q6B0B8 471 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 TRMT10BQ6PF06 316 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 ENPP6Q6UWR7 440 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 PLXDC2Q6UX71 529 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 ANGPTL8Q6UXH0 198 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 GPR180Q86V85 440 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 IGDCC3Q8IVU1 814 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 PPP1R14CQ8TAE6 165 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 GRK7Q8WTQ7 553 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 ZNF473Q8WTR7 871 aaKnown RBP15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 ANKRD49Q8WVL7 239 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 WNT2BQ93097 391 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 UCN3Q969E3 161 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 UBE2E3Q969T4 207 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 ESAMQ96AP7 390 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 WDR34Q96EX3 536 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 FAM111AQ96PZ2 611 aa15.66■□□□□ 0.1
CSNK1E-215ENST00000612795 GSX2Q9BZM3 304 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms