RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SEMA4FO95754 770 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 GASTP01350 101 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 POLR2CP19387 275 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 CSNK2A2P19784 350 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 MPIP34949 423 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 MASP1P48740 699 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 PXNP49023 591 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 CRISP3P54108 245 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 BNIP3Q12983 259 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 COL9A2Q14055 689 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 DGCR6Q14129 220 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 GPR18Q14330 331 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 TMEM64Q6YI46 380 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 HMGN2P46Q86SG4 172 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ASPGQ86U10 573 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 KRT73Q86Y46 540 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 IPCEF1Q8WWN9 437 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 WFDC6Q9BQY6 131 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 GIMAP4Q9NUV9 329 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 TMCC3Q9ULS5 477 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ARHGEF17Q96PE2 2063 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 A0A0J9YVX5 310 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 BCL10O95999 233 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 CBLP22681 906 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 PSMB9P28065 219 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 YPEL5P62699 121 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ILF3Q12906 894 aaKnown RBP eCLIP12.85□□□□□ -0.35
NEK3-205ENST00000610828 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 PRSS48Q7RTY5 328 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ZBTB46Q86UZ6 589 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 CCDC103Q8IW40 242 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 SVOPQ8N4V2 548 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 OR4D11Q8NGI4 311 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 OR9A2Q8NGT5 310 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 GAL3ST3Q96A11 431 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 OR2A14Q96R47 310 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 KLHL25Q9H0H3 589 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ANKRA2Q9H9E1 313 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 TRNAU1APQ9NX07 287 aaKnown RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 IMPAD1Q9NX62 359 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 ENPP5Q9UJA9 477 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 GPC6Q9Y625 555 aaPredicted RBP12.85□□□□□ -0.35
NEK3-205ENST00000610828 ZNF780BQ9Y6R6 833 aa12.85□□□□□ -0.35
NEK3-205ENST00000610828 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 M0R129 80 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 FHP07954 510 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 UGT2B7P16662 529 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 MC3RP41968 323 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 DGKEP52429 567 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 SNRPNP63162 240 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 CSNK2BP67870 215 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 HPCAP84074 193 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 PRR5P85299 388 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 CCINQ13939 588 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 PTGES3Q15185 160 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 FBXO42Q6P3S6 717 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 FRMD1Q8N878 549 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 OR13H1Q8NG92 308 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 RHOXF1Q8NHV9 184 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 FLVCR1-AS1Q8TAF5 88 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 SFXN5Q8TD22 340 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 C16orf58Q96GQ5 468 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 C6orf106Q9H6K1 298 aaPredicted RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 ACOT13Q9NPJ3 140 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 EQTNQ9NQ60 294 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 NDRG2Q9UN36 371 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 CTSVO60911 334 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 CHRM4P08173 479 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 NR2F6P10588 404 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ELAVL4P26378 380 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 CTSKP43235 329 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ENTPD1P49961 510 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ANXA11P50995 505 aaKnown RBP12.84□□□□□ -0.35
NEK3-205ENST00000610828 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 GPAT3Q53EU6 434 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 DCST1Q5T197 706 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ANKRD13BQ86YJ7 626 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 DEPDC4Q8N2C3 294 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 PARP8Q8N3A8 854 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 OR56A1Q8NGH5 318 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 FAM3CQ92520 227 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 COPS4Q9BT78 406 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
NEK3-205ENST00000610828 M0R3H8 397 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms