RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RHOXF1Q8NHV9 184 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 BBS10Q8TAM1 723 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 HMGB4Q8WW32 186 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 NMNAT1Q9HAN9 279 aaPredicted RBP26.46■■□□□ 1.83
CSPG5-205ENST00000610462 BCL2L10Q9HD36 194 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 PLCXD1Q9NUJ7 323 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 ENPP5Q9UJA9 477 aa26.46■■□□□ 1.83
CSPG5-205ENST00000610462 C10orf142B7Z368 130 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 TNFSF14O43557 240 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 ACVR2AP27037 513 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 MVKQ03426 396 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 DCTN2Q13561 401 aaKnown RBP26.45■■□□□ 1.83
CSPG5-205ENST00000610462 ZNF770Q6IQ21 691 aaPredicted RBP26.45■■□□□ 1.83
CSPG5-205ENST00000610462 SLC16A12Q6ZSM3 486 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 DEPDC4Q8N2C3 294 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 GTPBP3Q969Y2 492 aaKnown RBP26.45■■□□□ 1.83
CSPG5-205ENST00000610462 DHRS1Q96LJ7 313 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 SIGLEC11Q96RL6 698 aa26.45■■□□□ 1.83
CSPG5-205ENST00000610462 TOR1BO14657 336 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 FHP07954 510 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 ZNF888P0CJ79 500 aaPredicted RBP26.45■■□□□ 1.82
CSPG5-205ENST00000610462 POU2F1P14859 743 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 UGT2B7P16662 529 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 MPIP34949 423 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 CRISP3P54108 245 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 MLIPQ5VWP3 458 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 OR4D11Q8NGI4 311 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 MIPOL1Q8TD10 442 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 TM4SF19Q96DZ7 209 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 USP36Q9P275 1121 aaKnown RBP26.45■■□□□ 1.82
CSPG5-205ENST00000610462 MTCH2Q9Y6C9 303 aa26.45■■□□□ 1.82
CSPG5-205ENST00000610462 ARHGEF17Q96PE2 2063 aaPredicted RBP26.44■■□□□ 1.82
CSPG5-205ENST00000610462 SHISA7A6NL88 538 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 GASTP01350 101 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 HMGN2P05204 90 aaKnown RBP26.44■■□□□ 1.82
CSPG5-205ENST00000610462 MAGP20916 626 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 STT3AP46977 705 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 TEKQ02763 1124 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 LASP1Q14847 261 aaKnown RBP26.44■■□□□ 1.82
CSPG5-205ENST00000610462 TMEM107Q6UX40 140 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 VANGL1Q8TAA9 524 aaPredicted RBP26.44■■□□□ 1.82
CSPG5-205ENST00000610462 UTP15Q8TED0 518 aaKnown RBP26.44■■□□□ 1.82
CSPG5-205ENST00000610462 ZNF681Q96N22 645 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 TMCC3Q9ULS5 477 aa26.44■■□□□ 1.82
CSPG5-205ENST00000610462 TRBV4-1A0A0J9YWV2 114 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 A0A1W2PS29 197 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 EMC8O43402 210 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 NARSO43776 548 aaKnown RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 SEMA7AO75326 666 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 SLC35G6P0C7Q6 338 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 GLULP15104 373 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ILF3Q12906 894 aaKnown RBP eCLIP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 GPR18Q14330 331 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 GNA13Q14344 377 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 SYT6Q5T7P8 510 aaPredicted RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 AHSA2Q719I0 299 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 TRIM48Q8IWZ4 208 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 YIPF4Q9BSR8 244 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ACOT13Q9NPJ3 140 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ZNF226Q9NYT6 803 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ZNF780BQ9Y6R6 833 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 SCN3AQ9NY46 2000 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 TNFP01375 233 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 NR2F6P10588 404 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ZNF182P17025 639 aaPredicted RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 POLR2CP19387 275 aaPredicted RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 IDH2P48735 452 aaKnown RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 PRR5P85299 388 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 KLHL17Q6TDP4 642 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 DEF8Q6ZN54 512 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 CCDC81Q6ZN84 652 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ABI3BPQ7Z7G0 1075 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 RBM45Q8IUH3 476 aaKnown RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 OR13H1Q8NG92 308 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ZFPM2Q8WW38 1151 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 FAM3CQ92520 227 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 OTUB1Q96FW1 271 aaPredicted RBP26.43■■□□□ 1.82
CSPG5-205ENST00000610462 OR2A5Q96R48 311 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 SPATA5L1Q9BVQ7 753 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ROGDIQ9GZN7 287 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ACTR10Q9NZ32 417 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 PSORS1C1Q9UIG5 152 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 ACAD8Q9UKU7 415 aa26.43■■□□□ 1.82
CSPG5-205ENST00000610462 FADS2O95864 444 aaKnown RBP26.42■■□□□ 1.82
CSPG5-205ENST00000610462 BCL10O95999 233 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 RABIFP47224 123 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 FUT5Q11128 374 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 FOXD4Q12950 439 aaPredicted RBP26.42■■□□□ 1.82
CSPG5-205ENST00000610462 DGLUCYQ7Z3D6 616 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 CCDC103Q8IW40 242 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 C6orf106Q9H6K1 298 aaPredicted RBP26.42■■□□□ 1.82
CSPG5-205ENST00000610462 C3orf14Q9HBI5 128 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 BRWD1Q9NSI6 2320 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 OR6C74A6NCV1 312 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 PRAMEF26H0Y7S4 382 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 MAN1A2O60476 641 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 OXSR1O95747 527 aaPredicted RBP26.42■■□□□ 1.82
CSPG5-205ENST00000610462 H1F0P07305 194 aaKnown RBP26.42■■□□□ 1.82
CSPG5-205ENST00000610462 CHRM4P08173 479 aa26.42■■□□□ 1.82
CSPG5-205ENST00000610462 SMIM10L1P0DMW3 83 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms