RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZBTB26Q9HCK0 441 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 ACKR4Q9NPB9 350 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 QPCTLQ9NXS2 382 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 ALKBH4Q9NXW9 302 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 NINJ2Q9NZG7 142 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 SPRR3Q9UBC9 169 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 Q9UFV3 132 aa7.01□□□□□ -1.29
CUX1-219ENST00000606749 CNOT11Q9UKZ1 510 aaKnown RBP7.01□□□□□ -1.29
CUX1-219ENST00000606749 BOKQ9UMX3 212 aaPredicted RBP7.01□□□□□ -1.29
CUX1-219ENST00000606749 NINQ8N4C6 2090 aa7□□□□□ -1.29
CUX1-219ENST00000606749 AKAP9Q99996 3911 aa7□□□□□ -1.29
CUX1-219ENST00000606749 C2orf92A0A1B0GVN3 265 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ANKRD33BA6NCL7 494 aa7□□□□□ -1.29
CUX1-219ENST00000606749 LRRC3CA6NJW4 275 aa7□□□□□ -1.29
CUX1-219ENST00000606749 STX16-NPEPL1H3BU86 382 aa7□□□□□ -1.29
CUX1-219ENST00000606749 STX16O14662 325 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TRIM3O75382 744 aaPredicted RBP7□□□□□ -1.29
CUX1-219ENST00000606749 SEMA3DO95025 777 aa7□□□□□ -1.29
CUX1-219ENST00000606749 LRATO95237 230 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ACSL3O95573 720 aa7□□□□□ -1.29
CUX1-219ENST00000606749 CT62P0C5K7 136 aa7□□□□□ -1.29
CUX1-219ENST00000606749 COL6A2P12110 1019 aa7□□□□□ -1.29
CUX1-219ENST00000606749 GABRA1P14867 456 aa7□□□□□ -1.29
CUX1-219ENST00000606749 S1PR1P21453 382 aa7□□□□□ -1.29
CUX1-219ENST00000606749 PIK3R1P27986 724 aa7□□□□□ -1.29
CUX1-219ENST00000606749 SSTR4P31391 388 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ADH7P40394 386 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ARL1P40616 181 aaPredicted RBP7□□□□□ -1.29
CUX1-219ENST00000606749 MAGEA12P43365 314 aa7□□□□□ -1.29
CUX1-219ENST00000606749 XKP51811 444 aa7□□□□□ -1.29
CUX1-219ENST00000606749 CCNG1P51959 295 aa7□□□□□ -1.29
CUX1-219ENST00000606749 CKAP4Q07065 602 aaKnown RBP7□□□□□ -1.29
CUX1-219ENST00000606749 FUT7Q11130 342 aa7□□□□□ -1.29
CUX1-219ENST00000606749 FRG2Q64ET8 278 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TTC19Q6DKK2 380 aaPredicted RBP7□□□□□ -1.29
CUX1-219ENST00000606749 OR52E8Q6IFG1 317 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TMEM64Q6YI46 380 aa7□□□□□ -1.29
CUX1-219ENST00000606749 MILR1Q7Z6M3 343 aa7□□□□□ -1.29
CUX1-219ENST00000606749 NUDT13Q86X67 352 aa7□□□□□ -1.29
CUX1-219ENST00000606749 CLYBLQ8N0X4 340 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TAGAPQ8N103 731 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TMEM151AQ8N4L1 468 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ZNF615Q8N8J6 731 aa7□□□□□ -1.29
CUX1-219ENST00000606749 OR4K14Q8NGD5 310 aa7□□□□□ -1.29
CUX1-219ENST00000606749 NEIL3Q8TAT5 605 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TRPC4APQ8TEL6 797 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ISL2Q96A47 359 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ADIPOR1Q96A54 375 aa7□□□□□ -1.29
CUX1-219ENST00000606749 FRG2BQ96QU4 278 aa7□□□□□ -1.29
CUX1-219ENST00000606749 DOHHQ9BU89 302 aa7□□□□□ -1.29
CUX1-219ENST00000606749 OR10A5Q9H207 317 aa7□□□□□ -1.29
CUX1-219ENST00000606749 ZNF703Q9H7S9 590 aaPredicted RBP7□□□□□ -1.29
CUX1-219ENST00000606749 TEX10Q9NXF1 929 aaPredicted RBP7□□□□□ -1.29
CUX1-219ENST00000606749 AHSPQ9NZD4 102 aa7□□□□□ -1.29
CUX1-219ENST00000606749 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
CUX1-219ENST00000606749 ADAM29Q9UKF5 820 aa7□□□□□ -1.29
CUX1-219ENST00000606749 PCTPQ9UKL6 214 aa7□□□□□ -1.29
CUX1-219ENST00000606749 TMCO1Q9UM00 188 aa7□□□□□ -1.29
CUX1-219ENST00000606749 PCDHGB3Q9Y5G1 929 aa7□□□□□ -1.29
CUX1-219ENST00000606749 NPFFR2Q9Y5X5 522 aa7□□□□□ -1.29
CUX1-219ENST00000606749 A0A1B0GTL3 188 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CAPN14A8MX76 684 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 AHRRA9YTQ3 701 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 PPP6CO00743 305 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TP53I11O14683 189 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SMIM24O75264 130 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 URI1O94763 535 aaPredicted RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 SNX4O95219 450 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 INHBAP08476 426 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SBK3P0C264 359 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 PORP16435 677 aaPredicted RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 TRPC1P48995 793 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SERPINB9P50453 376 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 DLX5P56178 289 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 FBXW4P57775 412 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 IFT88Q13099 833 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TRAF3Q13114 568 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 DUSP8Q13202 625 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TSNAXIP1Q2TAA8 658 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SGO1Q5FBB7 561 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TBCELQ5QJ74 424 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CCNYL2Q5T2Q4 361 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 C10orf62Q5T681 223 aaPredicted RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 C1orf185Q5T7R7 199 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 RIPPLY2Q5TAB7 128 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 FNDC7Q5VTL7 733 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CES4AQ5XG92 561 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 HLA-DQA1Q5Y7H0 255 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 TMEM198Q66K66 360 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 BICRALQ6AI39 1079 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SPNS3Q6ZMD2 512 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 SEM1Q6ZVN7 128 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 RPS27LQ71UM5 84 aaKnown RBP6.99□□□□□ -1.29
CUX1-219ENST00000606749 PAGE2Q7Z2X7 111 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 CDH24Q86UP0 819 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 GALNT12Q8IXK2 581 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 ULK2Q8IYT8 1036 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 METTL4Q8N3J2 472 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 MMGT1Q8N4V1 131 aa6.99□□□□□ -1.29
CUX1-219ENST00000606749 C17orf47Q8NEP4 570 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms