RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SNX4O95219 450 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 PTX3P26022 381 aaPredicted RBP19.41■□□□□ 0.7
PNKP-212ENST00000599454 PAFAH1B1P43034 410 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 TMED10P49755 219 aaKnown RBP19.41■□□□□ 0.7
PNKP-212ENST00000599454 DGKQP52824 942 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 FOXD4Q12950 439 aaPredicted RBP19.41■□□□□ 0.7
PNKP-212ENST00000599454 GRTP1Q5TC63 336 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 LIPJQ5W064 366 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 PAMR1Q6UXH9 720 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 TBC1D1Q86TI0 1168 aaPredicted RBP19.41■□□□□ 0.7
PNKP-212ENST00000599454 KIF18BQ86Y91 864 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 ZNF441Q8N8Z8 693 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 REPS1Q96D71 796 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 TIMP4Q99727 224 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 PRDM14Q9GZV8 571 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 SAYSD1Q9NPB0 183 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 TRMT1Q9NXH9 659 aaKnown RBP19.41■□□□□ 0.7
PNKP-212ENST00000599454 SAR1BQ9Y6B6 198 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 MED12Q93074 2177 aa19.41■□□□□ 0.7
PNKP-212ENST00000599454 C2orf92A0A1B0GVN3 265 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 UBXN8O00124 270 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 PRKRAO75569 313 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 GOSR1O95249 250 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 HPNP05981 417 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 SLC35E2BP0CK96 405 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 SLC35E2P0CK97 266 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 NR2F6P10588 404 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 CRABP2P29373 138 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 CDK9P50750 372 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 RPP38P78345 283 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 CALCOCO2Q13137 446 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 NSUN5P2Q63ZY6 315 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 MRM1Q6IN84 353 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 C3orf62Q6ZUJ4 267 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 RAPH1Q70E73 1250 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 MTERF1Q99551 399 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 ZNF717Q9BY31 904 aaPredicted RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 UBQLN3Q9H347 655 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 DDX31Q9H8H2 851 aaKnown RBP19.4■□□□□ 0.7
PNKP-212ENST00000599454 DLL4Q9NR61 685 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 PSD3Q9NYI0 1048 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 WHRNQ9P202 907 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 RNF14Q9UBS8 474 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 ASB4Q9Y574 426 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 ANGPTL3Q9Y5C1 460 aa19.4■□□□□ 0.7
PNKP-212ENST00000599454 MED12LQ86YW9 2145 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 A0A0A6YYD5 115 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 CCDC189A1A4V9 331 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 SYCE1LA8MT33 242 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 UGDHO60701 494 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 CLPSP04118 112 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 LTA4HP09960 611 aaKnown RBP19.39■□□□□ 0.69
PNKP-212ENST00000599454 TACR1P25103 407 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 CUL3Q13618 768 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 NHSL2Q5HYW2 709 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 HLA-DQA1Q5Y7H0 255 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 POMZP3Q6PJE2 187 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 CYP20A1Q6UW02 462 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 PACS2Q86VP3 889 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 CTAGE3PQ8IX95 158 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 RNF175Q8N4F7 328 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 TEX9Q8N6V9 391 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 SPPL2AQ8TCT8 520 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 DOK4Q8TEW6 326 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 ANGPTL4Q9BY76 406 aa19.39■□□□□ 0.69
PNKP-212ENST00000599454 A0A1W2PR48 441 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 TUBAL3A6NHL2 446 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 CD8B2A6NJW9 211 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 H0YIV9 168 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 CDH16O75309 829 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 TRAPPC6AO75865 159 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 LRATO95237 230 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 RAF1P04049 648 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 FAM58BPP0C7Q3 252 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 EPXP11678 715 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 BSGP35613 385 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 MASP1P48740 699 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 ZNF136P52737 540 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 NRG3P56975 720 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 RPS13P62277 151 aaKnown RBP19.38■□□□□ 0.69
PNKP-212ENST00000599454 SORDQ00796 357 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 DLG1Q12959 904 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 SLMAPQ14BN4 828 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 VASNQ6EMK4 673 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 OR52E8Q6IFG1 317 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 CCDC91Q7Z6B0 441 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 MYLK4Q86YV6 388 aaPredicted RBP19.38■□□□□ 0.69
PNKP-212ENST00000599454 RHEBL1Q8TAI7 183 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 RILPQ96NA2 401 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 ACTR8Q9H981 624 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 C15orf41Q9Y2V0 281 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 NPFFR2Q9Y5X5 522 aa19.38■□□□□ 0.69
PNKP-212ENST00000599454 TMPRSS11DO60235 418 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 EEDO75530 441 aaKnown RBP19.37■□□□□ 0.69
PNKP-212ENST00000599454 IL18BPO95998 194 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 MTHFD2P13995 350 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 OPRM1P35372 400 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 FBXW4P57775 412 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 ADAM8P78325 824 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 SETDB1Q15047 1291 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms