RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TUBBP07437 444 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 CT62P0C5K7 136 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SLC35E2P0CK97 266 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 TSPAN8P19075 237 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SSTR4P31391 388 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 EBPQ15125 230 aaKnown RBP21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SGO1Q5FBB7 561 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 FRG2Q64ET8 278 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 EMBQ6PCB8 327 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 RNF111Q6ZNA4 994 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 OR4F6Q8NGB9 312 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 OR10G3Q8NGC4 313 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SLC22A8Q8TCC7 542 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 UBLCP1Q8WVY7 318 aaPredicted RBP21.09■□□□□ 0.97
CCDC61-207ENST00000599044 CAVIN3Q969G5 261 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SPACA9Q96E40 222 aaPredicted RBP21.09■□□□□ 0.97
CCDC61-207ENST00000599044 ART5Q96L15 291 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 FRG2BQ96QU4 278 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SMC6Q96SB8 1091 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SERPINI1Q99574 410 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 SPOCK3Q9BQ16 436 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 CHCHD2Q9Y6H1 151 aaPredicted RBP21.09■□□□□ 0.97
CCDC61-207ENST00000599044 ZNF407Q9C0G0 2248 aa21.09■□□□□ 0.97
CCDC61-207ENST00000599044 MED13LQ71F56 2210 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 CTIFO43310 598 aaKnown RBP21.08■□□□□ 0.97
CCDC61-207ENST00000599044 FBXO45P0C2W1 286 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 POU3F2P20265 443 aaPredicted RBP21.08■□□□□ 0.97
CCDC61-207ENST00000599044 SERPINB9P50453 376 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 RTL6Q6ICC9 239 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 TMEM211Q6ICI0 200 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 ZNF585AQ6P3V2 769 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 SLC29A4Q7RTT9 530 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 SLC15A4Q8N697 577 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 FAM13CQ8NE31 585 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 OR5M3Q8NGP4 307 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 LILRB4Q8NHJ6 448 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 RND1Q92730 232 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 PELOQ9BRX2 385 aaKnown RBP21.08■□□□□ 0.97
CCDC61-207ENST00000599044 CXorf21Q9HAI6 301 aa21.08■□□□□ 0.97
CCDC61-207ENST00000599044 NPDC1Q9NQX5 325 aaPredicted RBP21.08■□□□□ 0.97
CCDC61-207ENST00000599044 LRRC3CA6NJW4 275 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 FAM90A27PA6NNH2 459 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 SMIM24O75264 130 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 SEMA3DO95025 777 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 RPS17P08708 135 aaKnown RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 ENDOUP21128 410 aaKnown RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 GCAP28676 217 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 GALNSP34059 522 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 HSD17B3P37058 310 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 CDH13P55290 713 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 TFF3Q07654 80 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 SLC10A1Q14973 349 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 TTC19Q6DKK2 380 aaPredicted RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 OR52E8Q6IFG1 317 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 MEX3BQ6ZN04 569 aaKnown RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 MILR1Q7Z6M3 343 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 MMP21Q8N119 569 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF441Q8N8Z8 693 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 MYRIPQ8NFW9 859 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 TREX2Q9BQ50 279 aaPredicted RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 WDR41Q9HAD4 459 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 SPRR3Q9UBC9 169 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF180Q9UJW8 692 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF225Q9UK10 706 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 CNOT11Q9UKZ1 510 aaKnown RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 FAM215AQ9Y5M1 114 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 IKBKGQ9Y6K9 419 aa21.07■□□□□ 0.96
CCDC61-207ENST00000599044 INTS1Q8N201 2190 aaKnown RBP21.07■□□□□ 0.96
CCDC61-207ENST00000599044 KRT38O76015 456 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 TOXO94900 526 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 COL6A2P12110 1019 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 CHRNB4P30926 498 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 TSNAXIP1Q2TAA8 658 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 LETMD1Q6P1Q0 360 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 FBXW8Q8N3Y1 598 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF615Q8N8J6 731 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF483Q8TF39 744 aaPredicted RBP21.06■□□□□ 0.96
CCDC61-207ENST00000599044 MRPL57Q9BQC6 102 aaKnown RBP21.06■□□□□ 0.96
CCDC61-207ENST00000599044 TMCO1Q9UM00 188 aa21.06■□□□□ 0.96
CCDC61-207ENST00000599044 HCFC1P51610 2035 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 OR14I1A6ND48 311 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 OR6C76A6NM76 312 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 A8MT66 165 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 AQP7O14520 342 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 PDYNP01213 254 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 SHBGP04278 402 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 ACVR2AP27037 513 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 PIK3R1P27986 724 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 XKP51811 444 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 KCNJ2P63252 427 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 GGTA1PQ4G0N0 100 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 CCNYL2Q5T2Q4 361 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 METTL4Q8N3J2 472 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 ASB5Q8WWX0 329 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 TTYH2Q9BSA4 534 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 MRPL46Q9H2W6 279 aaKnown RBP21.05■□□□□ 0.96
CCDC61-207ENST00000599044 LDAHQ9H6V9 325 aa21.05■□□□□ 0.96
CCDC61-207ENST00000599044 ZNF703Q9H7S9 590 aaPredicted RBP21.05■□□□□ 0.96
CCDC61-207ENST00000599044 ZFP64Q9NPA5 681 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms