RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SP1P08047 785 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 MPIP34949 423 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC1A6P48664 564 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 HK2P52789 917 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 FUT7Q11130 342 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 MAP4K2Q12851 820 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 KIAA0040Q15053 153 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 MPEG1Q2M385 716 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 HLA-DQA1Q5Y7H0 255 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 OPN5Q6U736 354 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 MMP21Q8N119 569 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC15A4Q8N697 577 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC22A8Q8TCC7 542 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 SIGLEC12Q96PQ1 595 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC35C2Q9NQQ7 365 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 ERVK-11Q9UQG0 969 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 CFL2Q9Y281 166 aa16.04■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM200CA6NKL6 621 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 A8MVJ9 347 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 TMEM233B4DJY2 109 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 LSM1O15116 133 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC25A12O75746 678 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 BCAS2O75934 225 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 OR2J2O76002 312 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 NEURL1O76050 574 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 H2AFXP16104 143 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 DDX5P17844 614 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 BGNP21810 368 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 ASMTP46597 345 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 SLC37A1P57057 533 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 ATP6AP1LQ52LC2 224 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 PRR30Q53SZ7 412 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 PIGGQ5H8A4 983 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 ATG16L1Q676U5 607 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 FAM71E1Q6IPT2 247 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 CYP4Z2PQ8N1L4 340 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 OR2T11Q8NH01 316 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 GRHL3Q8TE85 626 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 FAR1Q8WVX9 515 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 EXOSC8Q96B26 276 aaKnown RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 CNRIP1Q96F85 164 aaPredicted RBP16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 SCMH1Q96GD3 660 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF681Q96N22 645 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 BBS4Q96RK4 519 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 RASL10BQ96S79 203 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 BRINP2Q9C0B6 783 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 TIMMDC1Q9NPL8 285 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 HPF1Q9NWY4 346 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 PTGDR2Q9Y5Y4 395 aa16.03■□□□□ 0.16
SHKBP1-212ENST00000596163 C2orf92A0A1B0GVN3 265 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 A0A1W2PS29 197 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 HRKO00198 91 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ITM2AO43736 263 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ARRB2P32121 409 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 RPL14P50914 215 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 RPL38P63173 70 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ELOAQ14241 798 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 MAPKAPK3Q16644 382 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 PRICKLE4Q2TBC4 344 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF750Q32MQ0 723 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ZNF468Q5VIY5 522 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 C9orf40Q8IXQ3 194 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 CCDC116Q8IYX3 515 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 DND1Q8IYX4 353 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 TAGAPQ8N103 731 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 VWA5B2Q8N398 1253 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 MGARPQ8TDB4 240 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 DOK4Q8TEW6 326 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 TP53INP1Q96A56 240 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 ERP27Q96DN0 273 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 FCRL1Q96LA6 429 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 BARD1Q99728 777 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 OR10A5Q9H207 317 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 LIN28AQ9H9Z2 209 aaKnown RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 KLHL1Q9NR64 748 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 TAS2R7Q9NYW3 318 aa16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.16
SHKBP1-212ENST00000596163 CNTRLQ7Z7A1 2325 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 KLRC4-KLRK1H3BQV0 150 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 PYCARD-AS1I3L0S3 204 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 NME2P1O60361 137 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 PEX11AO75192 247 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 SKAP2O75563 359 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 LYPLA1O75608 230 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 NME2P22392 152 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 SSTR4P31391 388 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 WDR4P57081 412 aaKnown RBP16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 MAD2L1Q13257 205 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 CEBPEQ15744 281 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 RFTN2Q52LD8 501 aaPredicted RBP16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 XKR7Q5GH72 579 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 IL20RBQ6UXL0 311 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 TICAM1Q8IUC6 712 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 FAM9CQ8IZT9 166 aa16.01■□□□□ 0.15
SHKBP1-212ENST00000596163 ZNF675Q8TD23 568 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms