RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NME4O00746 187 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 DNAJA2O60884 412 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 LDB3O75112 727 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 STAMBPO95630 424 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 FHP07954 510 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CPMP14384 443 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 TCN1P20061 433 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 AGXTP21549 392 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 PTPN6P29350 595 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 XCR1P46094 333 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 PDX1P52945 283 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 MTPNP58546 118 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 DCDP81605 110 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ID2Q02363 134 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 TLE3Q04726 772 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ABHD18Q0P651 414 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 BIKQ13323 160 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 DSG2Q14126 1118 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CEBPEQ15744 281 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CEACAM20Q6UY09 585 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 IFNEQ86WN2 208 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 LRRC25Q8N386 305 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 BMPERQ8N8U9 685 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 TMEM52Q8NDY8 209 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ZFP90Q8TF47 636 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ANKRD9Q96BM1 317 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 OR1F2PQ96R84 312 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CPPED1Q9BRF8 314 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC35A5Q9BS91 424 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 RBCK1Q9BYM8 510 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 TRIM8Q9BZR9 551 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 RAD21L1Q9H4I0 556 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 TPT1P8Q9HAU6 139 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 C3orf14Q9HBI5 128 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 NEUROD4Q9HD90 331 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 SLAMF7Q9NQ25 335 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC6A13Q9NSD5 602 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CD300AQ9UGN4 299 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 BCAP29Q9UHQ4 241 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 CORO2BQ9UQ03 480 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ERVK-11Q9UQG0 969 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 MAP4K5Q9Y4K4 846 aa12.26□□□□□ -0.45
SHKBP1-209ENST00000595803 ANKRD17O75179 2603 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 FGF17O60258 216 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 TIAF1O95411 115 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 KLK3P07288 261 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 JMJD7P0C870 316 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 HOXB9P17482 250 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 NT5EP21589 574 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 CCT3P49368 545 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 CDK9P50750 372 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MAPK10P53779 464 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 HSD17B7P56937 341 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 OCA2Q04671 838 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 LY6DQ14210 128 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 SELPLGQ14242 412 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 COLEC12Q5KU26 742 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MFSD4BQ5TF39 518 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 HES3Q5TGS1 186 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 C1orf146Q5VVC0 180 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 ANGPTL8Q6UXH0 198 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 NET1Q7Z628 596 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 SHISA5Q8N114 240 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 CLEC4FQ8N1N0 589 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 FAM13CQ8NE31 585 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 OR10A6Q8NH74 314 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 SNIP1Q8TAD8 396 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MOAP1Q96BY2 351 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 FAM120BQ96EK7 910 aaKnown RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 RNF31Q96EP0 1072 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 AURKBQ96GD4 344 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MAGED4Q96JG8 741 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 TAAR9Q96RI9 348 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 KCTD14Q9BQ13 255 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 DPH2Q9BQC3 489 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 ALOXE3Q9BYJ1 711 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 PIF1Q9H611 641 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 CXorf36Q9H7Y0 433 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MKKSQ9NPJ1 570 aaPredicted RBP12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 SPTBP11277 2137 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
SHKBP1-209ENST00000595803 CCDC187A0A096LP49 1063 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 RNF103-CHMP3A0A140T963 221 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 MYOCOSA0A1B0GUC4 107 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 A0A1W2PS29 197 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 PRORSD1PA6NEY8 169 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GSTA4O15217 222 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 EMC8O43402 210 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 OR10H2O60403 315 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 CPNE3O75131 537 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GMNNO75496 209 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 CDC123O75794 336 aaPredicted RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 SORBS2O94875 1100 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 BMP10O95393 424 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 SLC35E2P0CK97 266 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 HSD17B1P14061 328 aa12.24□□□□□ -0.45
SHKBP1-209ENST00000595803 GPX2P18283 190 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms