RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TRHRP34981 398 aaPredicted RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 PLEKHN1Q494U1 663 aaPredicted RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 RNF111Q6ZNA4 994 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF605Q86T29 641 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 TICAM1Q8IUC6 712 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 FNDC5Q8NAU1 212 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 EXOSC8Q96B26 276 aaKnown RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 MTERF3Q96E29 417 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.94■■□□□ 1.422e-6■□□□□ 11.2
TRIM28-204ENST00000594806 TRIM45Q9H8W5 580 aaPredicted RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 PNPOQ9NVS9 261 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 PLA2G3Q9NZ20 509 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 MYOTQ9UBF9 498 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 EIF3LQ9Y262 564 aaKnown RBP23.94■■□□□ 1.42
TRIM28-204ENST00000594806 KALRNO60229 2985 aa23.94■■□□□ 1.42
TRIM28-204ENST00000594806 A0A1W2PS29 197 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 TRPC5OSA6NMA1 111 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 SLITRK5O94991 958 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 PCSK2P16519 638 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 RPL3P39023 403 aaKnown RBP23.93■■□□□ 1.42
TRIM28-204ENST00000594806 EMX2Q04743 252 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 TUBA3CQ13748 450 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 PRICKLE4Q2TBC4 344 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 RPUSD3Q6P087 351 aaKnown RBP23.93■■□□□ 1.42
TRIM28-204ENST00000594806 TUBA3EQ6PEY2 450 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 SLC29A4Q7RTT9 530 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 R3HCC1LQ7Z5L2 792 aaKnown RBP23.93■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF321PQ8N8H1 164 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF675Q8TD23 568 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 LRRC8CQ8TDW0 803 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 DYDC1Q8WWB3 177 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 EGLN2Q96KS0 407 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 REEP4Q9H6H4 257 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 MEAF6Q9HAF1 191 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 INTS9Q9NV88 658 aaKnown RBP23.93■■□□□ 1.42
TRIM28-204ENST00000594806 ASIC5Q9NY37 505 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 CFL2Q9Y281 166 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 PCDHGB6Q9Y5F9 930 aa23.93■■□□□ 1.42
TRIM28-204ENST00000594806 HDAC3O15379 428 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 ITGA10O75578 1167 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 CYB561P49447 251 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 SLC37A1P57057 533 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 MPEG1Q2M385 716 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF750Q32MQ0 723 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 GPALPP1Q8IXQ4 340 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 VWA5B2Q8N398 1253 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 Q8NA96 180 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 CTHRC1Q96CG8 243 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 TSSK3Q96PN8 268 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 BBS4Q96RK4 519 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 NOP53Q9NZM5 478 aaKnown RBP23.92■■□□□ 1.42
TRIM28-204ENST00000594806 MAPRE3Q9UPY8 281 aa23.92■■□□□ 1.42
TRIM28-204ENST00000594806 EXO1Q9UQ84 846 aaKnown RBP23.92■■□□□ 1.42
TRIM28-204ENST00000594806 SMG1Q96Q15 3661 aaKnown RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 TMEM200CA6NKL6 621 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 MYO1GB0I1T2 1018 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 HRKO00198 91 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 PRKNO60260 465 aaPredicted RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 MAN1A2O60476 641 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 BCAS2O75934 225 aaPredicted RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 JUNP05412 331 aaKnown RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 NTSP30990 170 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 CD96P40200 585 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 HLCSP50747 726 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 SSR4P51571 173 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 INAQ16352 499 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 IL23RQ5VWK5 629 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 PRICKLE2Q7Z3G6 844 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 CCDC116Q8IYX3 515 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 FAM9CQ8IZT9 166 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 TMEM156Q8N614 296 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 SLC15A4Q8N697 577 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 CATSPER1Q8NEC5 780 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 PIWIL2Q8TC59 973 aaKnown RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 THAP3Q8WTV1 239 aaPredicted RBP23.91■■□□□ 1.42
TRIM28-204ENST00000594806 C7orf26Q96N11 449 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 NUF2Q9BZD4 464 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 BRINP2Q9C0B6 783 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 AKTIPQ9H8T0 292 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 MAT2BQ9NZL9 334 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 ZNF639Q9UID6 485 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 PCDHGA10Q9Y5H3 936 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 CSAG2Q9Y5P2 127 aa23.91■■□□□ 1.42
TRIM28-204ENST00000594806 TTLL8A6PVC2 850 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 SLC28A2O43868 658 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 PRAMEF2O60811 474 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 CT62P0C5K7 136 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 OC90Q02509 493 aaPredicted RBP23.9■■□□□ 1.42
TRIM28-204ENST00000594806 MGAT2Q10469 447 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 PDE7AQ13946 482 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 HSP90B2PQ58FF3 399 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 C9orf40Q8IXQ3 194 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 LIX1Q8N485 282 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 PPCDCQ96CD2 204 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 OR10A5Q9H207 317 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 BAIAP2L1Q9UHR4 511 aa23.9■■□□□ 1.42
TRIM28-204ENST00000594806 IFI6P09912 130 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 LBPP18428 481 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 S1PR1P21453 382 aa23.89■■□□□ 1.41
TRIM28-204ENST00000594806 SSTR4P31391 388 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms