RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CSF3RQ99062 836 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 ZNF700Q9H0M5 742 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 PRTFDC1Q9NRG1 225 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 MRGBPQ9NV56 204 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 PHF11Q9UIL8 331 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 ADAM29Q9UKF5 820 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 A0A0A6YYD5 115 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 GOLGA8QA0A0J9YX86 632 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 SERTM1A2A2V5 107 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 GOLGA8OA6NCC3 632 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 GOLGA8NF8WBI6 632 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 MASP2O00187 686 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 MAOAP21397 527 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 CPN2P22792 545 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 LSM12Q3MHD2 195 aaKnown RBP18.39■□□□□ 0.53
LSM4-203ENST00000593829 ZFP28Q8NHY6 868 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 EFCAB1Q9HAE3 211 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 ZNF160Q9HCG1 818 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 RIC8BQ9NVN3 520 aa18.39■□□□□ 0.53
LSM4-203ENST00000593829 LYARQ9NX58 379 aaKnown RBP18.39■□□□□ 0.53
LSM4-203ENST00000593829 BLACEA4D250 179 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 A6NL46 340 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 ACOT8O14734 319 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 CHRNGP07510 517 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 HNRNPFP52597 415 aaKnown RBP18.38■□□□□ 0.53
LSM4-203ENST00000593829 MRPS22P82650 360 aaKnown RBP18.38■□□□□ 0.53
LSM4-203ENST00000593829 CEACAM7Q14002 265 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 PCOLCEQ15113 449 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 MRM1Q6IN84 353 aaKnown RBP18.38■□□□□ 0.53
LSM4-203ENST00000593829 HOMEZQ8IX15 550 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 LILRA2Q8N149 483 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 GALNT16Q8N428 558 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 TMEM52Q8NDY8 209 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 ABHD17AQ96GS6 310 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 ACPTQ9BZG2 426 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 RALYQ9UKM9 306 aaKnown RBP18.38■□□□□ 0.53
LSM4-203ENST00000593829 G3BP2Q9UN86 482 aaKnown RBP18.38■□□□□ 0.53
LSM4-203ENST00000593829 CACNA1GO43497 2377 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 IGSF10Q6WRI0 2623 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 ZFYVE26Q68DK2 2539 aa18.38■□□□□ 0.53
LSM4-203ENST00000593829 CHD6Q8TD26 2715 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 AZIN1O14977 448 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 TMPRSS11DO60235 418 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 CEACAM4O75871 244 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 GBAP04062 536 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 KLK1P06870 262 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 TLX1P31314 330 aaPredicted RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 SOX8P57073 446 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 OR4D2P58180 307 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 SLC13A2Q13183 592 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 IRAK1BP1Q5VVH5 260 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 CLEC6AQ6EIG7 209 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 SCIMPQ6UWF3 145 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 COMMD6Q7Z4G1 85 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 BBC3Q96PG8 261 aaPredicted RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 NECTIN3Q9NQS3 549 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 ATG4BQ9Y4P1 393 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 ASB4Q9Y574 426 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 IGKV3D-11A0A0A0MRZ8 115 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 IGHV3-20A0A0C4DH32 117 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 CTNSO60931 367 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 BUD31P41223 144 aaPredicted RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 TXNL4AP83876 142 aaKnown RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 MYBPC3Q14896 1274 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 CCNYL2Q5T2Q4 361 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 SLC39A7Q92504 469 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 RCN3Q96D15 328 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 DUS3LQ96G46 650 aaKnown RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 PKP2Q99959 881 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 SLC25A23Q9BV35 468 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 WDR41Q9HAD4 459 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 GALNT8Q9NY28 637 aa18.37■□□□□ 0.53
LSM4-203ENST00000593829 PCDHGA9Q9Y5G4 932 aaKnown RBP18.37■□□□□ 0.53
LSM4-203ENST00000593829 TCRBV16S1A1N1A0A5B0 115 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 PROM1O43490 865 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 SEC24DO94855 1032 aaPredicted RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 FGF4P08620 206 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 ICAM2P13598 275 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 ITGA3P26006 1051 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 TPP2P29144 1249 aaPredicted RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 MS4A2Q01362 244 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 HMGCS1Q01581 520 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 TNFRSF17Q02223 184 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 TRIM46Q7Z4K8 759 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 CHERPQ8IWX8 916 aaKnown RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 C1orf52Q8N6N3 182 aaKnown RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 BHLHE22Q8NFJ8 381 aaPredicted RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 FDCSPQ8NFU4 85 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 C9orf43Q8TAL5 461 aaPredicted RBP18.36■□□□□ 0.53
LSM4-203ENST00000593829 CHTF18Q8WVB6 975 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 IMMP1LQ96LU5 166 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 CNBD2Q96M20 576 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 FIS1Q9Y3D6 152 aa18.36■□□□□ 0.53
LSM4-203ENST00000593829 CHEK2O96017 543 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 C8BP07358 591 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 ZNF23P17027 643 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 Q0VFX4 171 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 IMPG1Q17R60 797 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 KANK2Q63ZY3 851 aa18.35■□□□□ 0.53
LSM4-203ENST00000593829 CLYBLQ8N0X4 340 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms