RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TBC1D1Q86TI0 1168 aaPredicted RBP14.99□□□□□ -0.01
LIG1-205ENST00000593425 PPM1NQ8N819 430 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 RNASE6Q93091 150 aaKnown RBP14.99□□□□□ -0.01
LIG1-205ENST00000593425 NXNL1Q96CM4 212 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 TIMP4Q99727 224 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 NAPGQ99747 312 aaPredicted RBP14.99□□□□□ -0.01
LIG1-205ENST00000593425 CENPKQ9BS16 269 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 LYARQ9NX58 379 aaKnown RBP14.99□□□□□ -0.01
LIG1-205ENST00000593425 GRHL1Q9NZI5 618 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 TSC22D4Q9Y3Q8 395 aa14.99□□□□□ -0.01
LIG1-205ENST00000593425 C2orf92A0A1B0GVN3 265 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 ANKRD33BA6NCL7 494 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 LRRC14BA6NHZ5 514 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 AHRRA9YTQ3 701 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 FAM58BPP0C7Q3 252 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 DNASE1P24855 282 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 PEX19P40855 299 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 ARFIP1P53367 373 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 IRF9Q00978 393 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 CALCOCO2Q13137 446 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 SETDB1Q15047 1291 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 RPS6KA2Q15349 733 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 TBCELQ5QJ74 424 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 FNDC7Q5VTL7 733 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 TMEM198Q66K66 360 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 LACC1Q8IV20 430 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 CENPLQ8N0S6 344 aaPredicted RBP14.98□□□□□ -0.01
LIG1-205ENST00000593425 TAGAPQ8N103 731 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 GOT1L1Q8NHS2 421 aaPredicted RBP14.98□□□□□ -0.01
LIG1-205ENST00000593425 SPPL2AQ8TCT8 520 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 FAM222BQ8WU58 562 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 KCTD4Q8WVF5 259 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 RILPQ96NA2 401 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 ERP44Q9BS26 406 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 PRDM14Q9GZV8 571 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 UBQLN3Q9H347 655 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 GSX1Q9H4S2 264 aaPredicted RBP14.98□□□□□ -0.01
LIG1-205ENST00000593425 WHRNQ9P202 907 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 SLC6A5Q9Y345 797 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 ANGPTL3Q9Y5C1 460 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 PCDHGA11Q9Y5H2 935 aa14.98□□□□□ -0.01
LIG1-205ENST00000593425 H0YIV9 168 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 TRAPPC6AO75865 159 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 ACSL3O95573 720 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 GBAP04062 536 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 HPNP05981 417 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 CT62P0C5K7 136 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 SLC35E2P0CK97 266 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 GALNSP34059 522 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 TIMP3P35625 211 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 CDK9P50750 372 aaKnown RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 CPSF6Q16630 551 aaKnown RBP eCLIP14.97□□□□□ -0.01
LIG1-205ENST00000593425 DCST1Q5T197 706 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 LIPJQ5W064 366 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 CYP20A1Q6UW02 462 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 PAMR1Q6UXH9 720 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 DDX31Q9H8H2 851 aaKnown RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 ACTR8Q9H981 624 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 CXorf21Q9HAI6 301 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 DLL4Q9NR61 685 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 SNX15Q9NRS6 342 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 TEX10Q9NXF1 929 aaPredicted RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 ZNF629Q9UEG4 869 aaPredicted RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 MTRF1LQ9UGC7 380 aaKnown RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 NPFFR2Q9Y5X5 522 aa14.97□□□□□ -0.01
LIG1-205ENST00000593425 HRNRQ86YZ3 2850 aaPredicted RBP14.97□□□□□ -0.01
LIG1-205ENST00000593425 TP53I11O14683 189 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 PGRMC2O15173 223 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 RAD51CO43502 376 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 IL2RAP01589 272 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 GSTA2P09210 222 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 PTX3P26022 381 aaPredicted RBP14.96□□□□□ -0.01
LIG1-205ENST00000593425 CRABP2P29373 138 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 PIK3CGP48736 1102 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 MASP1P48740 699 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 NEK2P51955 445 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 AGFG1P52594 562 aaKnown RBP14.96□□□□□ -0.01
LIG1-205ENST00000593425 PHEXP78562 749 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 CUL3Q13618 768 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 PFKFB4Q16877 469 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 NSUN5P2Q63ZY6 315 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 VASNQ6EMK4 673 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 OR52E8Q6IFG1 317 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 MAATS1Q7Z4T9 603 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 NUDT13Q86X67 352 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 PRR22Q8IZ63 422 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 WDR20Q8TBZ3 569 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 FBF1Q8TES7 1133 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 ADIPOR1Q96A54 375 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 TP53INP1Q96A56 240 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 HSPBAP1Q96EW2 488 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 LRRC46Q96FV0 321 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 GNRHR2Q96P88 292 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 ALPK1Q96QP1 1244 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 UGT2B28Q9BY64 529 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 ANGPTL4Q9BY76 406 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 EPB41L4BQ9H329 900 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 WDR41Q9HAD4 459 aa14.96□□□□□ -0.01
LIG1-205ENST00000593425 RYDENQ9NUL5 291 aaKnown RBP14.96□□□□□ -0.01
LIG1-205ENST00000593425 CAMK2AQ9UQM7 478 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms