RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SLC35E2P0CK97 266 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 GDF1P27539 372 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 SERPINB8P50452 374 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 DLX5P56178 289 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 NTRK2Q16620 822 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 SYT10Q6XYQ8 523 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 C17orf53Q8N3J3 647 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-207ENST00000593089 NEIL3Q8TAT5 605 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 DIO2Q92813 273 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 ATP6V1E2Q96A05 226 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 GPR78Q96P69 363 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 NOL11Q9H8H0 719 aaKnown RBP18.81■□□□□ 0.6
TRIM47-207ENST00000593089 SLC24A3Q9HC58 644 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 TEX10Q9NXF1 929 aaPredicted RBP18.81■□□□□ 0.6
TRIM47-207ENST00000593089 B4GALT7Q9UBV7 327 aa18.81■□□□□ 0.6
TRIM47-207ENST00000593089 FREM3P0C091 2139 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 FOXE1O00358 373 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-207ENST00000593089 PGRMC2O15173 223 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 CLDN9O95484 217 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 ALDOAP04075 364 aaKnown RBP18.8■□□□□ 0.6
TRIM47-207ENST00000593089 PIK3R1P27986 724 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 GALNSP34059 522 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 SNTB1Q13884 538 aaKnown RBP18.8■□□□□ 0.6
TRIM47-207ENST00000593089 SLC25A35Q3KQZ1 300 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 TECRLQ5HYJ1 363 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 RIPPLY2Q5TAB7 128 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 HLA-DQA1Q5Y7H0 255 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 OR52E8Q6IFG1 317 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 ULK2Q8IYT8 1036 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 PTGR2Q8N8N7 351 aaPredicted RBP18.8■□□□□ 0.6
TRIM47-207ENST00000593089 MYRIPQ8NFW9 859 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 NRGNQ92686 78 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 ZNF597Q96LX8 424 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 CXorf21Q9HAI6 301 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 ACKR4Q9NPB9 350 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 ZNF358Q9NW07 568 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 QPCTLQ9NXS2 382 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 PSD3Q9NYI0 1048 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 L3MBTL1Q9Y468 752 aa18.8■□□□□ 0.6
TRIM47-207ENST00000593089 C15orf38-AP3S2A0A0A6YYH1 394 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 FAM47E-STBD1D6RA91 191 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 OR7A17O14581 309 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 TP53I11O14683 189 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 CT62P0C5K7 136 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 FBXW4P57775 412 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 UBAP2Q5T6F2 1119 aaKnown RBP18.79■□□□□ 0.6
TRIM47-207ENST00000593089 TMEM198Q66K66 360 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 GALNT12Q8IXK2 581 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 PLD6Q8N2A8 252 aaKnown RBP18.79■□□□□ 0.6
TRIM47-207ENST00000593089 ZNF441Q8N8Z8 693 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 PHF21BQ96EK2 531 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 SERPINI1Q99574 410 aa18.79■□□□□ 0.6
TRIM47-207ENST00000593089 C2CD3Q4AC94 2353 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 CAPN14A8MX76 684 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 TRIM3O75382 744 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-207ENST00000593089 PHBP35232 272 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 CCNG1P51959 295 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ART1P52961 327 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ETF1P62495 437 aaKnown RBP18.78■□□□□ 0.6
TRIM47-207ENST00000593089 DUSP8Q13202 625 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 RPS6KA2Q15349 733 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 TBCELQ5QJ74 424 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 BICRALQ6AI39 1079 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 TTC19Q6DKK2 380 aaPredicted RBP18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ARSKQ6UWY0 536 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 SEM1Q6ZVN7 128 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ZZZ3Q8IYH5 903 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 TP53INP1Q96A56 240 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ZDHHC18Q9NUE0 388 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 RYDENQ9NUL5 291 aaKnown RBP18.78■□□□□ 0.6
TRIM47-207ENST00000593089 NINJ2Q9NZG7 142 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 PCDHGB3Q9Y5G1 929 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 NPFFR2Q9Y5X5 522 aa18.78■□□□□ 0.6
TRIM47-207ENST00000593089 ANKRD33BA6NCL7 494 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 TRAPPC6AO75865 159 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 SEMA3DO95025 777 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 KLK1P06870 262 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 NT5EP21589 574 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 WNT3P56703 355 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 FRG2Q64ET8 278 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 C8orf74Q6P047 294 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 METTL2BQ6P1Q9 378 aaKnown RBP18.77■□□□□ 0.6
TRIM47-207ENST00000593089 ZNF572Q7Z3I7 529 aaPredicted RBP18.77■□□□□ 0.6
TRIM47-207ENST00000593089 PRR22Q8IZ63 422 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 OR4K14Q8NGD5 310 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 SPPL2AQ8TCT8 520 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 RILPQ96NA2 401 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 NSUN5Q96P11 429 aaKnown RBP18.77■□□□□ 0.6
TRIM47-207ENST00000593089 FRG2BQ96QU4 278 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 LRRC1Q9BTT6 524 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 MRPL1Q9BYD6 325 aaKnown RBP18.77■□□□□ 0.6
TRIM47-207ENST00000593089 OR10A5Q9H207 317 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 ACSS3Q9H6R3 686 aa18.77■□□□□ 0.6
TRIM47-207ENST00000593089 EXPH5Q8NEV8 1989 aa18.77■□□□□ 0.59
TRIM47-207ENST00000593089 HSPB2A8KAH6 182 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 KDM4EB2RXH2 506 aaPredicted RBP18.76■□□□□ 0.59
TRIM47-207ENST00000593089 CD1EP15812 388 aa18.76■□□□□ 0.59
TRIM47-207ENST00000593089 DNAJA1P31689 397 aaKnown RBP18.76■□□□□ 0.59
TRIM47-207ENST00000593089 UQCRC1P31930 480 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms