RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZNF321PQ8N8H1 164 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 ACTRT2Q8TDY3 377 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 SLC39A7Q92504 469 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 ZNF354BQ96LW1 612 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 BRINP2Q9C0B6 783 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX39A-221ENST00000593026 SH3BP4Q9P0V3 963 aa13.9□□□□□ -0.18
DDX39A-221ENST00000593026 ZNF223Q9UK11 482 aaPredicted RBP13.9□□□□□ -0.18
DDX39A-221ENST00000593026 IGSF10Q6WRI0 2623 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 MYO1GB0I1T2 1018 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 HRKO00198 91 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 SCAMP2O15127 329 aaKnown RBP13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ZFAND5O76080 213 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 IGKV3-11P04433 115 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 CT62P0C5K7 136 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 PRPS1L1P21108 318 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 PTGER1P34995 402 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 NCBP2P52298 156 aaKnown RBP eCLIP13.89□□□□□ -0.19
DDX39A-221ENST00000593026 MEP1AQ16819 746 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 PRSS53Q2L4Q9 553 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 PRICKLE4Q2TBC4 344 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ACER2Q5QJU3 275 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 EPGNQ6UW88 154 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 RNF111Q6ZNA4 994 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ACAD11Q709F0 780 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 HPS6Q86YV9 775 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 LGI4Q8N135 537 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 KRTCAP2Q8N6L1 136 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ADCY4Q8NFM4 1077 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 CEP70Q8NHQ1 597 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 BBC3Q96PG8 261 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-221ENST00000593026 LMF1Q96S06 567 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ZBTB20Q9HC78 741 aaPredicted RBP13.89□□□□□ -0.19
DDX39A-221ENST00000593026 MAT2BQ9NZL9 334 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ABI3Q9P2A4 366 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 ATP6V1HQ9UI12 483 aa13.89□□□□□ -0.19
DDX39A-221ENST00000593026 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
DDX39A-221ENST00000593026 CROCCQ5TZA2 2017 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 GABRR3A8MPY1 467 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 POLR3GO15318 223 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 PDPK1O15530 556 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 DPM1O60762 260 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 ALDOCP09972 364 aaKnown RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 PCSK2P16519 638 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 SSTR4P31391 388 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 AQP5P55064 265 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 CLDN8P56748 225 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 RNF4P78317 190 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 FUT7Q11130 342 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 MAP4K2Q12851 820 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF385BQ569K4 471 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 FAM111BQ6SJ93 734 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 IGFL2Q6UWQ7 119 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 ZADH2Q8N4Q0 377 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 OR7A2PQ8NGA2 310 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 OR5L2Q8NGL0 311 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 OR9A2Q8NGT5 310 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 OR8K3Q8NH51 312 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 SUN3Q8TAQ9 357 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF675Q8TD23 568 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 OR52B2Q96RD2 323 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 PRPF18Q99633 342 aaKnown RBP13.88□□□□□ -0.19
DDX39A-221ENST00000593026 DPY30Q9C005 99 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 CDCP1Q9H5V8 836 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 CCDC134Q9H6E4 229 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 TCF7L2Q9NQB0 619 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 ATAD3AQ9NVI7 634 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 AIG1Q9NVV5 245 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 STMN3Q9NZ72 180 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 MAPRE3Q9UPY8 281 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 PIEZO2Q9H5I5 2752 aa13.88□□□□□ -0.19
DDX39A-221ENST00000593026 CPAMD8Q8IZJ3 1885 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 DYTNA2CJ06 578 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 OR6C76A6NM76 312 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 FCHO1O14526 889 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 PRKNO60260 465 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 MAN1A2O60476 641 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 VIMP08670 466 aaKnown RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 IDH3AP50213 366 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 SLC37A1P57057 533 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 C21orf58P58505 322 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 MRPS35P82673 323 aaKnown RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 MGAT2Q10469 447 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 LSM12Q3MHD2 195 aaKnown RBP13.87□□□□□ -0.19
DDX39A-221ENST00000593026 ZNF628Q5EBL2 1059 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 CPTPQ5TA50 214 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 TMEM198Q66K66 360 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 IGFL3Q6UXB1 125 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 SLC29A4Q7RTT9 530 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 RIMKLAQ8IXN7 391 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 C9orf40Q8IXQ3 194 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 BEST3Q8N1M1 668 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 ARMC10Q8N2F6 343 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 OR7G1Q8NGA0 311 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 ZFP28Q8NHY6 868 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 KAT2AQ92830 837 aa13.87□□□□□ -0.19
DDX39A-221ENST00000593026 CIDECQ96AQ7 238 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms