RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 MMP21Q8N119 569 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 PLA2G15Q8NCC3 412 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 UFD1Q92890 307 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 TMEM159Q96B96 161 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 GFM1Q96RP9 751 aaKnown RBP17.04■□□□□ 0.32
SPC24-206ENST00000592540 KCNJ15Q99712 375 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 WFDC6Q9BQY6 131 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 ZDHHC6Q9H6R6 413 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 MVB12BQ9H7P6 319 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 GALNT9Q9HCQ5 603 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 SLC23A1Q9UHI7 598 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 SH2B3Q9UQQ2 575 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 CKAP5Q14008 2032 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 TMEM129A0AVI4 362 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 IL3P08700 152 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 ACADMP11310 421 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 DDX5P17844 614 aaKnown RBP17.04■□□□□ 0.32
SPC24-206ENST00000592540 GABRA5P31644 462 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 FKBP1BP68106 108 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 MRPL28Q13084 256 aaKnown RBP17.04■□□□□ 0.32
SPC24-206ENST00000592540 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
SPC24-206ENST00000592540 FGF11Q92914 225 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 ATF6BQ99941 703 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 A4GALTQ9NPC4 353 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 ISYNA1Q9NPH2 558 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 TAAR2Q9P1P5 351 aa17.04■□□□□ 0.32
SPC24-206ENST00000592540 SHOXO15266 292 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 TSPAN6O43657 245 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 PLOD3O60568 738 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 NME6O75414 186 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 PTBP1P26599 531 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPC24-206ENST00000592540 CCND3P30281 292 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 GIPRP48546 466 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 ARL14EPQ8N8R7 260 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 SPERTQ8NA61 448 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 ZNF354BQ96LW1 612 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 HYLS1Q96M11 299 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 COQ7Q99807 217 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 B3GNT2Q9NY97 397 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 ACAD8Q9UKU7 415 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 CASP8AP2Q9UKL3 1982 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 MEN1O00255 615 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 ACP2P11117 423 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 AP2S1P53680 142 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 MAPK12P53778 367 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 EFNB1P98172 346 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 RIN1Q13671 783 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 MPPE1Q53F39 396 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 CD200R1LQ6Q8B3 271 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 TMEM150AQ86TG1 271 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 SLC37A3Q8NCC5 494 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 AKAP1Q92667 903 aaKnown RBP eCLIP17.03■□□□□ 0.322e-13■■■■□ 24.5
SPC24-206ENST00000592540 TRMT2BQ96GJ1 504 aaKnown RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 FGF20Q9NP95 211 aaPredicted RBP17.03■□□□□ 0.32
SPC24-206ENST00000592540 MIEF1Q9NQG6 463 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 PLXNA2O75051 1894 aa17.03■□□□□ 0.32
SPC24-206ENST00000592540 PIPSLA2A3N6 862 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 ANKDD1BA6NHY2 528 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 INMT-MINDY4F8WBC2 141 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 NPPBP16860 134 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 KCNJ5P48544 419 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 RAB25P57735 213 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 SMIM11AP58511 58 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 RAB40BQ12829 278 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 PIN1Q13526 163 aaPredicted RBP17.02■□□□□ 0.32
SPC24-206ENST00000592540 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
SPC24-206ENST00000592540 TYW3Q6IPR3 259 aaKnown RBP17.02■□□□□ 0.32
SPC24-206ENST00000592540 PODNL1Q6PEZ8 512 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 C9orf62Q8N4C0 152 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 C2orf69Q8N8R5 385 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 ZFP41Q8N8Y5 198 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 RAB8BQ92930 207 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 NEURL3Q96EH8 262 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 RNFT2Q96EX2 444 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 TMEM169Q96HH4 297 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 SENP5Q96HI0 755 aaPredicted RBP17.02■□□□□ 0.32
SPC24-206ENST00000592540 MRPS18AQ9NVS2 196 aaKnown RBP17.02■□□□□ 0.32
SPC24-206ENST00000592540 ICKQ9UPZ9 632 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 CDH10Q9Y6N8 788 aa17.02■□□□□ 0.32
SPC24-206ENST00000592540 TRDV1A0A1B0GX56 115 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 ISM1B1AKI9 464 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 SGK494L7N484 410 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 NCR1O76036 304 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 CELF2O95319 508 aaKnown RBP17.02■□□□□ 0.31
SPC24-206ENST00000592540 MMP11P24347 488 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 AVPR1BP47901 424 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 INPP1P49441 399 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 CTSCP53634 463 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 TBPL1P62380 186 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 COX10Q12887 443 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 SNAPC1Q16533 368 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 DUSP6Q16828 381 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 C22orf39Q6P5X5 142 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 TRILQ7L0X0 811 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 ZNF480Q8WV37 535 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 EFCAB11Q9BUY7 163 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 MAT2BQ9NZL9 334 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 KCNN3Q9UGI6 736 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 A4GNTQ9UNA3 340 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms