RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ID2Q02363 134 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ASPHQ12797 758 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 CUL3Q13618 768 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ERCC6LQ2NKX8 1250 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SLC22A10Q63ZE4 541 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 RTL6Q6ICC9 239 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 MRM1Q6IN84 353 aaKnown RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 METTL2BQ6P1Q9 378 aaKnown RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 CDH24Q86UP0 819 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 OR4N5Q8IXE1 308 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 C9orf40Q8IXQ3 194 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ST13P4Q8IZP2 240 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 PLD6Q8N2A8 252 aaKnown RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 HUS1BQ8NHY5 278 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SARAFQ96BY9 339 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 FBXL20Q96IG2 436 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ART5Q96L15 291 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SMC6Q96SB8 1091 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 EPB41L4BQ9H329 900 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 OR51B5Q9H339 312 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 DDX31Q9H8H2 851 aaKnown RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 PROK2Q9HC23 129 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ACKR4Q9NPB9 350 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SEMA4BQ9NPR2 832 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 QPCTLQ9NXS2 382 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 TUBA8Q9NY65 449 aaPredicted RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 CNIH4Q9P003 139 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 CPSF2Q9P2I0 782 aaKnown RBP9.59□□□□□ -0.87
VPS4B-207ENST00000591519 PHF11Q9UIL8 331 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ASB4Q9Y574 426 aa9.59□□□□□ -0.87
VPS4B-207ENST00000591519 ANKRD17O75179 2603 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 CELSR1Q9NYQ6 3014 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ATP6AP2A0A1C7CYW4 349 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ANKRD33BA6NCL7 494 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SYCE1LA8MT33 242 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 G3V3Y1 287 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 GOLGA8RI6L899 631 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SAP18O00422 153 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PLPP1O14494 284 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 DYRK3O43781 588 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ATP6AP2O75787 350 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 GPR75O95800 540 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SNRPAP09012 282 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 CELA3AP09093 270 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PCNAP12004 261 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 GFAPP14136 432 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ALOX15P16050 662 aaPredicted RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SLCO1A2P46721 670 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZFP36L2P47974 494 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 DNASE1L1P49184 302 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 MAN2A2P49641 1150 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PLIN5Q00G26 463 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 TNFRSF17Q02223 184 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 FOLH1Q04609 750 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SETDB1Q15047 1291 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ACAP2Q15057 778 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PCBP2Q15366 365 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 FAM83EQ2M2I3 478 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SPRED3Q2MJR0 410 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 C18orf63Q68DL7 685 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF585AQ6P3V2 769 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 KLC3Q6P597 504 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 B3GNT6Q6ZMB0 384 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 DGAT2L6Q6ZPD8 337 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 CLYBLQ8N0X4 340 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 LRRC25Q8N386 305 aaPredicted RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 TEX9Q8N6V9 391 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 L3MBTL4Q8NA19 623 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 OR5M9Q8NGP3 310 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 OR5M3Q8NGP4 307 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SLC22A8Q8TCC7 542 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PPWD1Q96BP3 646 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZBTB9Q96C00 473 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SPACA9Q96E40 222 aaPredicted RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 PELOQ9BRX2 385 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 CENPKQ9BS16 269 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SORBS1Q9BX66 1292 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF717Q9BY31 904 aaPredicted RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 GRIP2Q9C0E4 1043 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZFP64Q9NPA5 681 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ZNF180Q9UJW8 692 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 ACAD8Q9UKU7 415 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 LIPGQ9Y5X9 500 aa9.58□□□□□ -0.88
VPS4B-207ENST00000591519 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.58□□□□□ -0.88
VPS4B-207ENST00000591519 NINQ8N4C6 2090 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 A0A0A6YYD5 115 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 TRGV5A0A0B4J1U4 118 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 A0A0G2JNJ9 132 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 IQANK1A0A1B0GTG1 560 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 A0A1W2PR48 441 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 LRRC14BA6NHZ5 514 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 OR6C76A6NM76 312 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 FAM90A27PA6NNH2 459 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 FAM47E-STBD1D6RA91 191 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 HRKO00198 91 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 FOXE1O00358 373 aaPredicted RBP9.57□□□□□ -0.88
VPS4B-207ENST00000591519 SH3BGRLO75368 114 aa9.57□□□□□ -0.88
VPS4B-207ENST00000591519 KLHL2O95198 593 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms