RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 RASAL1O95294 804 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 GPR75O95800 540 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 KRT6AP02538 564 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 KRT6BP04259 564 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 KLK1P06870 262 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 CHN1P15882 459 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 ALOX15P16050 662 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 MST1P26927 711 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 KRT6CP48668 564 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 PLIN5Q00G26 463 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 PMP22Q01453 160 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 CSTF3Q12996 717 aaKnown RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 BIKQ13323 160 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 EIF2S3LQ2VIR3 472 aaKnown RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 OR52E8Q6IFG1 317 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 HSDL2Q6YN16 418 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 FRMD7Q6ZUT3 714 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 PAGE2Q7Z2X7 111 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 ST13P4Q8IZP2 240 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 BANPQ8N9N5 519 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 DNAJB8Q8NHS0 232 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 SUN3Q8TAQ9 357 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 THAP3Q8WTV1 239 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 APOPT1Q96IL0 206 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 KCNA7Q96RP8 456 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 TMEM109Q9BVC6 243 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 PARD6BQ9BYG5 372 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 ROPN1BQ9BZX4 212 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 OR8D2Q9GZM6 311 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 ROPN1Q9HAT0 212 aaPredicted RBP10.4□□□□□ -0.74
SMAD4-211ENST00000590499 OXSMQ9NWU1 459 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 AHSPQ9NZD4 102 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 MYOTQ9UBF9 498 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 GTF3C1Q12789 2109 aa10.4□□□□□ -0.74
SMAD4-211ENST00000590499 MYO7BQ6PIF6 2116 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 TLDC2A0PJX2 215 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 HRKO00198 91 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PGRMC2O15173 223 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 NME2P1O60361 137 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 ULK1O75385 1050 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 ITGA10O75578 1167 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 SLC25A12O75746 678 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CLPSP04118 112 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 SP1P08047 785 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 COX7A2P14406 83 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CPA3P15088 417 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 TNNI3P19429 210 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 NME2P22392 152 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 GALNSP34059 522 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CYB561P49447 251 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 HK2P52789 917 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 NAGLUP54802 743 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 FOXA1P55317 472 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 NAA20P61599 178 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 RNF4P78317 190 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 OC90Q02509 493 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PCLAFQ15004 111 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CCNYL2Q5T2Q4 361 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 FHL5Q5TD97 284 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 NDUFAF5Q5TEU4 345 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 SLC25A25Q6KCM7 469 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 WFDC8Q8IUA0 241 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 C1orf52Q8N6N3 182 aaKnown RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 HORMAD2Q8N7B1 307 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CCNYL1Q8N7R7 359 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 GBP7Q8N8V2 638 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 TMEM178AQ8NBL3 297 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 METTL6Q8TCB7 284 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CHTF18Q8WVB6 975 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PPWD1Q96BP3 646 aaKnown RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 C11orf24Q96F05 449 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 SENP5Q96HI0 755 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 FBXL20Q96IG2 436 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 C5orf34Q96MH7 638 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 FRMD6Q96NE9 622 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 DGAT2Q96PD7 388 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PELOQ9BRX2 385 aaKnown RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 WDR41Q9HAD4 459 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 TNFRSF12AQ9NP84 129 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 MID1IP1Q9NPA3 183 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 KLHL1Q9NR64 748 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 VPS29Q9UBQ0 182 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 CES1P1Q9UKY3 287 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 YARS2Q9Y2Z4 477 aaKnown RBP10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PLLPQ9Y342 182 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 TIMM22Q9Y584 194 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 PCDHA9Q9Y5H5 950 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 EXPH5Q8NEV8 1989 aa10.39□□□□□ -0.75
SMAD4-211ENST00000590499 H3BQF6 201 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 J3QW42 95 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF354AO60765 605 aaPredicted RBP10.38□□□□□ -0.75
SMAD4-211ENST00000590499 OR2J2O76002 312 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 WISP2O76076 250 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 CRYABP02511 175 aaKnown RBP10.38□□□□□ -0.75
SMAD4-211ENST00000590499 SLC35E2P0CK97 266 aa10.38□□□□□ -0.75
SMAD4-211ENST00000590499 RNF224P0DH78 156 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms