RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 Q9UFV3 132 aa16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 CHCHD2Q9Y6H1 151 aaPredicted RBP16.51■□□□□ 0.23
PRKCSH-211ENST00000590098 C2orf92A0A1B0GVN3 265 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 TP53I11O14683 189 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 AIFM1O95831 613 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 GBAP04062 536 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 RFPL3SP0C7P2 107 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 PIK3R1P27986 724 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 CCNG1P51959 295 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 RIPPLY3P57055 190 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 CKAP4Q07065 602 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 TESK1Q15569 626 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 NTRK2Q16620 822 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 TBCELQ5QJ74 424 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 HLA-DQA1Q5Y7H0 255 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 TTC19Q6DKK2 380 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 TMEM200AQ86VY9 491 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 PTGR2Q8N8N7 351 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 DIO2Q92813 273 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 GPR78Q96P69 363 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 PROK2Q9HC23 129 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 ACKR4Q9NPB9 350 aa16.5■□□□□ 0.23
PRKCSH-211ENST00000590098 PGRMC2O15173 223 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 SEMA3DO95025 777 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ZWINTO95229 277 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 LRATO95237 230 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ALDOAP04075 364 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 RBP1P09455 135 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ENDOUP21128 410 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ADH7P40394 386 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 TRPC1P48995 793 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 SLC25A35Q3KQZ1 300 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 TECRLQ5HYJ1 363 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 RIPPLY2Q5TAB7 128 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 C6orf163Q5TEZ5 329 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 SPNS3Q6ZMD2 512 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 WDR53Q7Z5U6 358 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 OR4K14Q8NGD5 310 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 NEIL3Q8TAT5 605 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 PHF21BQ96EK2 531 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ZNF597Q96LX8 424 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 CDK15Q96Q40 435 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 SLC6A15Q9H2J7 730 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 ZDHHC18Q9NUE0 388 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 AHSPQ9NZD4 102 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 CNOT11Q9UKZ1 510 aaKnown RBP16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 TMCO1Q9UM00 188 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 PCDHGB3Q9Y5G1 929 aa16.49■□□□□ 0.23
PRKCSH-211ENST00000590098 LRRC3CA6NJW4 275 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 OR7A17O14581 309 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 GDF1P27539 372 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 SSTR4P31391 388 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 TMED10P49755 219 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 NRG3P56975 720 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 IFT88Q13099 833 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 RPS6KA2Q15349 733 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 C10orf62Q5T681 223 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 FRG2Q64ET8 278 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 LIX1LQ8IVB5 337 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 GALNT12Q8IXK2 581 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 PLD6Q8N2A8 252 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 OR52B6Q8NGF0 335 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 UCN3Q969E3 161 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 FRG2BQ96QU4 278 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 LRRC1Q9BTT6 524 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 ACSS3Q9H6R3 686 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 CXorf21Q9HAI6 301 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 TEX10Q9NXF1 929 aaPredicted RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 NINJ2Q9NZG7 142 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 MTRF1LQ9UGC7 380 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 IKBKGQ9Y6K9 419 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 ITPR3Q14573 2671 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 MTORP42345 2549 aa16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 ANKHD1Q8IWZ3 2542 aaKnown RBP16.48■□□□□ 0.23
PRKCSH-211ENST00000590098 C15orf38-AP3S2A0A0A6YYH1 394 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 ANKRD33BA6NCL7 494 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 SMIM24O75264 130 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 TRAPPC6AO75865 159 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 SNX4O95219 450 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 CLPSP04118 112 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 KLK1P06870 262 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 INHBAP08476 426 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 XKP51811 444 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 FBXW4P57775 412 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 RPP38P78345 283 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 TMEM64Q6YI46 380 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 TAOK1Q7L7X3 1001 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 ULK2Q8IYT8 1036 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 ZNF441Q8N8Z8 693 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 NTMT1Q9BV86 223 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 ADAM29Q9UKF5 820 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 NPFFR2Q9Y5X5 522 aa16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
PRKCSH-211ENST00000590098 HSPB2A8KAH6 182 aa16.46■□□□□ 0.23
PRKCSH-211ENST00000590098 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms