RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 PTPN13Q12923 2485 aa17.09■□□□□ 0.33
H3F3B-206ENST00000587560 SOCS6O14544 535 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 IGHEP01854 428 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 LIFP15018 202 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 STX4Q12846 297 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 IL10RAQ13651 578 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 NSDHLQ15738 373 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PRICKLE4Q2TBC4 344 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 TIGD2Q4W5G0 525 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ZNF628Q5EBL2 1059 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PAGE3Q5JUK9 113 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 FHL5Q5TD97 284 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ANXA8L1Q5VT79 327 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PPP1R32Q7Z5V6 425 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 CCDC116Q8IYX3 515 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 CLECL1Q8IZS7 167 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 IL22RA1Q8N6P7 574 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PTPMT1Q8WUK0 201 aaPredicted RBP17.08■□□□□ 0.32
H3F3B-206ENST00000587560 OR5P2Q8WZ92 322 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ZBED6CLQ96FA7 236 aaPredicted RBP17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PHF12Q96QT6 1004 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 OR52E6Q96RD3 313 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 PELOQ9BRX2 385 aaKnown RBP17.08■□□□□ 0.32
H3F3B-206ENST00000587560 SLC25A23Q9BV35 468 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 CXorf21Q9HAI6 301 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ADAP2Q9NPF8 381 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 GIMAP4Q9NUV9 329 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 NTMQ9P121 344 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ZNF639Q9UID6 485 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 ENTPD4Q9Y227 616 aa17.08■□□□□ 0.32
H3F3B-206ENST00000587560 MYOCOSA0A1B0GUC4 107 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 A0A1W2PRB8 838 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 CCDC154A6NI56 674 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 PLOD2O00469 737 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 COX4I1P13073 169 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 WT1P19544 449 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 S1PR1P21453 382 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 NTSP30990 170 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MPIP34949 423 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 GPR143P51810 404 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 HBA1P69905 142 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 PLIN5Q00G26 463 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 LRRC74AQ0VAA2 488 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MAP4K2Q12851 820 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 SRSF6Q13247 344 aaKnown RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MAPRE2Q15555 327 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 ELAVL1Q15717 326 aaKnown RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MFSD4BQ5TF39 518 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 KIRREL2Q6UWL6 708 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 ZNF551Q7Z340 670 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 SNX32Q86XE0 403 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 NFAM1Q8NET5 270 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 BBS4Q96RK4 519 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 GPN2Q9H9Y4 310 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MAT2BQ9NZL9 334 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MAP10Q9P2G4 905 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 MRPS18BQ9Y676 258 aaKnown RBP17.07■□□□□ 0.32
H3F3B-206ENST00000587560 COL12A1Q99715 3063 aa17.07■□□□□ 0.32
H3F3B-206ENST00000587560 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 BBIP1A8MTZ0 92 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 J3QKU1 62 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CREG1O75629 220 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 SLITRK5O94991 958 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 C6orf47O95873 294 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CLPSP04118 112 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CT62P0C5K7 136 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 T-ENOLP0DO92 83 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 EFNA1P20827 205 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 NCBP2P52298 156 aaKnown RBP eCLIP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CYLC2Q14093 348 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 PCOLCEQ15113 449 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 LTB4RQ15722 352 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CRTC2Q53ET0 693 aaPredicted RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 LRIF1Q5T3J3 769 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 SLC2A7Q6PXP3 512 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 DLEU7Q6UYE1 221 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 CPEB2Q7Z5Q1 589 aaKnown RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 ZNF248Q8NDW4 579 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 OR9A2Q8NGT5 310 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 SLC39A7Q92504 469 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 PPWD1Q96BP3 646 aaKnown RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 INPP5KQ9BT40 448 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 EFHD1Q9BUP0 239 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 PAIP1Q9H074 479 aaKnown RBP17.06■□□□□ 0.32
H3F3B-206ENST00000587560 ZNF700Q9H0M5 742 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 SLC6A13Q9NSD5 602 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 GMEB1Q9Y692 573 aa17.06■□□□□ 0.32
H3F3B-206ENST00000587560 IGHV1-45A0A0A0MS14 117 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 LOC100653049A0A140TA62 436 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 CCT8L1PA6NM43 557 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 PLOD3O60568 738 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 KRT34O76011 436 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 PSMG1O95456 288 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 DDAH2O95865 285 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 IGKV3-11P04433 115 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 ZCCHC18P0CG32 403 aa17.05■□□□□ 0.32
H3F3B-206ENST00000587560 COX6A1P12074 109 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms