RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ZNF749O43361 778 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SUV39H1O43463 412 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CHST10O43529 356 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ASNA1O43681 348 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SLC28A2O43868 658 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 PRAMEF10O60809 474 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 PRAMEF2O60811 474 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SCN2BO60939 215 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 LDB3O75112 727 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CPNE3O75131 537 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 PRKRAO75569 313 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 CREG1O75629 220 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SERPINB7O75635 380 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 RFPL3O75679 317 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SORBS2O94875 1100 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 GPR75O95800 540 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 B3GALT4O96024 378 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 AK1P00568 194 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SERPINA1P01009 418 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 IFNA16P05015 189 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ATP1B1P05026 303 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 BCHEP06276 602 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 KLK3P07288 261 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 CD63P08962 238 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 NR2F1P10589 423 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 MYF5P13349 255 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CD1EP15812 388 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 NCK1P16333 377 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ITGA2P17301 1181 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TNNI3P19429 210 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 MATN1P21941 496 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 IFNA8P32881 189 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 MC3RP41968 323 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 GCGRP47871 477 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 HSPA13P48723 471 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CDK9P50750 372 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR4D2P58180 307 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 RAB15P59190 212 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 PHC1P78364 1004 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CDK6Q00534 326 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZNF155Q12901 538 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 ILKQ13418 452 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 RUNX2Q13950 521 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ELOAQ14241 798 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 IL11RAQ14626 422 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 KCNAB1Q14722 419 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CEBPEQ15744 281 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 MINDY4Q4G0A6 757 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.82□□□□□ -1.48
LIG3-206ENST00000586058 GPAT3Q53EU6 434 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CCDC157Q569K6 752 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SAXO2Q658L1 398 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TCEAL6Q6IPX3 200 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 REEP3Q6NUK4 255 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TNFAIP8L2Q6P589 184 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZCCHC12Q6PEW1 402 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZNF551Q7Z340 670 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 C6orf120Q7Z4R8 191 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CYP4Z1Q86W10 505 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SLC44A2Q8IWA5 706 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZC3H7AQ8IWR0 971 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 MSRB3Q8IXL7 192 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ST13P4Q8IZP2 240 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 VWA5B2Q8N398 1253 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 DTWD1Q8N5C7 304 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 METTL27Q8N6F8 245 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 ICA1LQ8NDH6 482 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR52E4Q8NGH9 312 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR9A2Q8NGT5 310 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR51Q1Q8NH59 317 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR1L3Q8NH93 324 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 PSMA8Q8TAA3 256 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 BBS10Q8TAM1 723 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 PROX1Q92786 737 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ATOH1Q92858 354 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 TCEAL3Q969E4 200 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 EME1Q96AY2 570 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 FKBP10Q96AY3 582 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZNF501Q96CX3 271 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 CNRIP1Q96F85 164 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 TPD52L3Q96J77 140 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 VPS50Q96JG6 964 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 C10orf90Q96M02 699 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZNF583Q96ND8 569 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ZNF285Q96NJ3 590 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CSF3RQ99062 836 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SEPHS2Q99611 448 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TACO1Q9BSH4 297 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 ACTRT3Q9BYD9 372 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 RBCK1Q9BYM8 510 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 AICDAQ9GZX7 198 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OR51I1Q9H343 314 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SMOC1Q9H4F8 434 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 TMEM38AQ9H6F2 299 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ARMC7Q9H6L4 198 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CXorf36Q9H7Y0 433 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 MKKSQ9NPJ1 570 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 EQTNQ9NQ60 294 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 OLAHQ9NV23 265 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ARMC1Q9NVT9 282 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms